RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 RDH5Q92781 318 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 DMRTA2Q96SC8 542 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 DPCDQ9BVM2 203 aaPredicted RBP12.13□□□□□ -0.47
CALD1-207ENST00000430085 IFT22Q9H7X7 185 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 RP1L1Q8IWN7 2480 aaPredicted RBP12.13□□□□□ -0.47
CALD1-207ENST00000430085 PLSCR5A0PG75 271 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 C9orf170A2RU37 121 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 IGHV3-13P01766 116 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 GLAP06280 429 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 ACAA1P09110 424 aaPredicted RBP12.13□□□□□ -0.47
CALD1-207ENST00000430085 DNASE1P24855 282 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 SELENOVP59797 346 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 RAP2BP61225 183 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 TMEM128Q5BJH2 165 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 C22orf34Q6ZV56 151 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 PEG10Q86TG7 708 aaKnown RBP12.13□□□□□ -0.47
CALD1-207ENST00000430085 WFDC8Q8IUA0 241 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 ST6GALNAC3Q8NDV1 305 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 OR2Z1Q8NG97 314 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 ZFAND1Q8TCF1 268 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 PHB2Q99623 299 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 WDR13Q9H1Z4 485 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 RIMS4Q9H426 269 aaPredicted RBP12.13□□□□□ -0.47
CALD1-207ENST00000430085 C5orf66Q9H5L9 145 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 MGAT4AQ9UM21 535 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 C14orf166Q9Y224 244 aaKnown RBP12.13□□□□□ -0.47
CALD1-207ENST00000430085 SPTA1P02549 2419 aa12.13□□□□□ -0.47
CALD1-207ENST00000430085 HEATR1Q9H583 2144 aaKnown RBP12.12□□□□□ -0.47
CALD1-207ENST00000430085 PRR14LQ5THK1 2151 aa12.12□□□□□ -0.47
CALD1-207ENST00000430085 TRAV24A0A0B4J272 114 aa12.12□□□□□ -0.47
CALD1-207ENST00000430085 C3orf80F5H4A9 247 aa12.12□□□□□ -0.47
CALD1-207ENST00000430085 C1QL1O75973 258 aa12.12□□□□□ -0.47
CALD1-207ENST00000430085 OR2A4O95047 310 aa12.12□□□□□ -0.47
CALD1-207ENST00000430085 NAPSAO96009 420 aa12.12□□□□□ -0.47
CALD1-207ENST00000430085 GLP1RP43220 463 aa12.12□□□□□ -0.47
CALD1-207ENST00000430085 MPPED2Q15777 294 aa12.12□□□□□ -0.47
CALD1-207ENST00000430085 SRSF7Q16629 238 aaKnown RBP eCLIP12.12□□□□□ -0.47
CALD1-207ENST00000430085 SPIN3Q5JUX0 258 aa12.12□□□□□ -0.47
CALD1-207ENST00000430085 PRAMEF6Q5VXH4 476 aa12.12□□□□□ -0.47
CALD1-207ENST00000430085 LRP11Q86VZ4 500 aa12.12□□□□□ -0.47
CALD1-207ENST00000430085 POC1AQ8NBT0 407 aa12.12□□□□□ -0.47
CALD1-207ENST00000430085 TMEM185AQ8NFB2 350 aa12.12□□□□□ -0.47
CALD1-207ENST00000430085 CASTOR1Q8WTX7 329 aa12.12□□□□□ -0.47
CALD1-207ENST00000430085 GTF3AQ92664 365 aaKnown RBP12.12□□□□□ -0.47
CALD1-207ENST00000430085 OR2A7Q96R45 310 aa12.12□□□□□ -0.47
CALD1-207ENST00000430085 SYT3Q9BQG1 590 aa12.12□□□□□ -0.47
CALD1-207ENST00000430085 BOLA1Q9Y3E2 137 aa12.12□□□□□ -0.47
CALD1-207ENST00000430085 FAM208BQ5VWN6 2430 aa12.12□□□□□ -0.47
CALD1-207ENST00000430085 A0A1B0GWJ7 208 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 SH2D1BO14796 132 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 NOS1APO75052 506 aaPredicted RBP12.11□□□□□ -0.47
CALD1-207ENST00000430085 SIX6O95475 246 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 PI3P19957 117 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 PTAFRP25105 342 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 CA7P43166 264 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 H2BFSP57053 126 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 MSMPQ1L6U9 139 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 C2orf68Q2NKX9 166 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 LIN54Q6MZP7 749 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 Q6P435 159 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 DHRS11Q6UWP2 260 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 Q6ZPA2 131 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 Q6ZS49 121 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 ZNF843Q8N446 348 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 MITD1Q8WV92 249 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 TMEM171Q8WVE6 324 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 TLNRD1Q9H1K6 362 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 Q9N2K0 584 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 PLSCR3Q9NRY6 295 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 UFSP2Q9NUQ7 469 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 PIPOXQ9P0Z9 390 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 GLS2Q9UI32 602 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 PAIP2BQ9ULR5 123 aaKnown RBP12.11□□□□□ -0.47
CALD1-207ENST00000430085 COL6A6A6NMZ7 2263 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 hCG_1807616A0A1W2PRN6 198 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 SIRPB1O00241 398 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 DUS4LO95620 317 aaKnown RBP12.11□□□□□ -0.47
CALD1-207ENST00000430085 OR2H2O95918 312 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 ZNF146Q15072 292 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 PAN3Q58A45 887 aaKnown RBP12.11□□□□□ -0.47
CALD1-207ENST00000430085 ZNF660Q6AZW8 331 aaPredicted RBP12.11□□□□□ -0.47
CALD1-207ENST00000430085 ZNF826PQ6ZT77 177 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 C11orf53Q8IXP5 236 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 ASB13Q8WXK3 278 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 RTBDNQ9BSG5 229 aaPredicted RBP12.11□□□□□ -0.47
CALD1-207ENST00000430085 TMPRSS13Q9BYE2 586 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 CLEC4MQ9H2X3 399 aaPredicted RBP12.11□□□□□ -0.47
CALD1-207ENST00000430085 HSPB11Q9Y547 144 aa12.11□□□□□ -0.47
CALD1-207ENST00000430085 KIR2DS1A0A191URI9 304 aa12.1□□□□□ -0.47
CALD1-207ENST00000430085 GLRA1P23415 457 aa12.1□□□□□ -0.47
CALD1-207ENST00000430085 FCGR2CP31995 323 aa12.1□□□□□ -0.47
CALD1-207ENST00000430085 MDH2P40926 338 aaKnown RBP12.1□□□□□ -0.47
CALD1-207ENST00000430085 KIR2DS4P43632 304 aa12.1□□□□□ -0.47
CALD1-207ENST00000430085 KIR2DS1Q14954 304 aa12.1□□□□□ -0.47
CALD1-207ENST00000430085 LPCAT3Q6P1A2 487 aa12.1□□□□□ -0.47
CALD1-207ENST00000430085 WDR82Q6UXN9 313 aa12.1□□□□□ -0.47
CALD1-207ENST00000430085 HES4Q9HCC6 221 aa12.1□□□□□ -0.47
CALD1-207ENST00000430085 IGLV3-9A0A075B6K5 115 aa12.09□□□□□ -0.47
CALD1-207ENST00000430085 SLC33A1O00400 549 aaPredicted RBP12.09□□□□□ -0.47
CALD1-207ENST00000430085 KNG1P01042 644 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms