RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 HBE1P02100 147 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 DEFA6Q01524 100 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 IGF2-ASQ6U949 168 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 CLEC2AQ6UVW9 174 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 MISP3Q96FF7 219 aa11.25□□□□□ -0.61
PTCH1-207ENST00000429896 NPIPB13A6NJU9 1138 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 NPIPB4C9JG80 1138 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 H3BP45 60 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 PNPP00491 289 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 DGCR2P98153 550 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 FNDC7Q5VTL7 733 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 ST6GALNAC3Q8NDV1 305 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 MOB3AQ96BX8 217 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 ZNF354AO60765 605 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-207ENST00000429896 SS18L1O75177 396 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-207ENST00000429896 TMEM127O75204 238 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 B3GALNT1O75752 331 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 C17orf107Q6ZR85 190 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 RNASE6Q93091 150 aaKnown RBP11.24□□□□□ -0.61
PTCH1-207ENST00000429896 MS4A3Q96HJ5 214 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 CCL19Q99731 98 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 IGLV1-36A0A0B4J1U3 117 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 SLC17A2O00624 439 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 IGHA1P01876 353 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 DUSP1P28562 367 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 PTGFRP43088 359 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 Q1RN00 199 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 ACOT7LQ6ZUV0 252 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 OR2W3Q7Z3T1 314 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 CCDC190Q86UF4 302 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 RNF141Q8WVD5 230 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 SCPEP1Q9HB40 452 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 DCAF16Q9NXF7 216 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 PLEKHB1Q9UF11 243 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-207ENST00000429896 CRXO43186 299 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-207ENST00000429896 C10orf128Q5T292 105 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 LGI3Q8N145 548 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 MSL2Q9HCI7 577 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 ATP6V1G2-DDX39BF2Z307 99 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 SPINK4O60575 86 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 CT45A10P0DMU9 189 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 STUMQ69YW2 141 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 ARHGEF39Q8N4T4 335 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 OR52B4Q8NGK2 314 aa11.24□□□□□ -0.61
PTCH1-207ENST00000429896 RAMP1O60894 148 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 ECI1P42126 302 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 ZNF90Q03938 601 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 ZNF266Q14584 549 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 H3F3CQ6NXT2 135 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 NHLRC1Q6VVB1 395 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 PRSS35Q8N3Z0 413 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 KDF1Q8NAX2 398 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-207ENST00000429896 FUT3P21217 361 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 AKR1C3P42330 323 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 GABRA6Q16445 453 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 Q56UQ5 140 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 PXDC1Q5TGL8 231 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 ABLIM2Q6H8Q1 611 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 MFSD4AQ8N468 514 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 C1orf162Q8NEQ5 155 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-207ENST00000429896 OR2AK2Q8NG84 335 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 OR5V1Q9UGF6 321 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 STARD10Q9Y365 291 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 COL4A3Q01955 1670 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 HRH1P35367 487 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 GPR6P46095 362 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-207ENST00000429896 GAMTQ14353 236 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 FRRS1LQ9P0K9 344 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 KIF26AQ9ULI4 1882 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-207ENST00000429896 CKAP5Q14008 2032 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 OR2C1O95371 312 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 FCGR2CP31995 323 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 BTG1P62324 171 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 RPS4XP62701 263 aaKnown RBP11.23□□□□□ -0.61
PTCH1-207ENST00000429896 CYB5R1Q9UHQ9 305 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 POMT1Q9Y6A1 747 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 IGKV3-7A0A075B6H7 116 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 MED19A0JLT2 244 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-207ENST00000429896 COX7A2P2O60397 106 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 ZNF205O95201 554 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 THY1P04216 161 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 COX5BP10606 129 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 TMEM267Q0VDI3 215 aaPredicted RBP11.23□□□□□ -0.61
PTCH1-207ENST00000429896 RTN4RQ9BZR6 473 aa11.23□□□□□ -0.61
PTCH1-207ENST00000429896 NKX2-6A6NCS4 301 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 H3F3AP84243 136 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 SPNS3Q6ZMD2 512 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 ERGIC1Q969X5 290 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 MED30Q96HR3 178 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 LAMP3Q9UQV4 416 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 NUDT19A8MXV4 375 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 FGF7P21781 194 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 DERL3Q96Q80 235 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 UBE2L5PA0A1B0GUS4 154 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 DBX1A6NMT0 343 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 AKR7A2O43488 359 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 COX7A1P24310 79 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 MDH2P40926 338 aaKnown RBP11.22□□□□□ -0.61
PTCH1-207ENST00000429896 MMP16P51512 607 aa11.22□□□□□ -0.61
PTCH1-207ENST00000429896 FAM27D1Q5T7N8 215 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms