RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 NMES1Q9C002 83 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 RAB33BQ9H082 229 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 PCED1AQ9H1Q7 454 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 ZNF286AQ9HBT8 521 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 NECAP2Q9NVZ3 263 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 COA4Q9NYJ1 87 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 FOXD3Q9UJU5 478 aaPredicted RBP7.03□□□□□ -1.28
HPS4-205ENST00000429411 KCNS2Q9ULS6 477 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 PTPN13Q12923 2485 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 ATG2AQ2TAZ0 1938 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 IGHV5-10-1A0A0J9YXX1 117 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 F2RL1P55085 397 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 SUMO3P55854 103 aaPredicted RBP7.03□□□□□ -1.28
HPS4-205ENST00000429411 CNN3Q15417 329 aaKnown RBP7.03□□□□□ -1.28
HPS4-205ENST00000429411 VHLLQ6RSH7 139 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 FAM24BQ8N5W8 94 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 OR14K1Q8NGZ2 314 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 SLC25A43Q8WUT9 341 aaPredicted RBP7.03□□□□□ -1.28
HPS4-205ENST00000429411 CLCC1Q96S66 551 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 PIMREGQ9BSJ6 248 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 HDGFL3Q9Y3E1 203 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 FREM1Q5H8C1 2179 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 WDFY3Q8IZQ1 3526 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 TRAV39A0A0B4J263 110 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 FAM24AA6NFZ4 105 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 FAM166BA8MTA8 275 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 UMAD1C9J7I0 102 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 C3orf80F5H4A9 247 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 TERTO14746 1132 aaKnown RBP7.03□□□□□ -1.28
HPS4-205ENST00000429411 CER1O95813 267 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 FOLR3P41439 243 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 PLGLB1Q02325 96 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 FOXO1Q12778 655 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 ZP4Q12836 540 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 LINC00696Q6ZRV3 163 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 WDSUB1Q8N9V3 476 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 ERGIC1Q969X5 290 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 PTX4Q96A99 478 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 NRIP2Q9BQI9 281 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 RTBDNQ9BSG5 229 aaPredicted RBP7.03□□□□□ -1.28
HPS4-205ENST00000429411 NIT2Q9NQR4 276 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 UFSP2Q9NUQ7 469 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 MED9Q9NWA0 146 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 NDRG3Q9UGV2 375 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 ANXA10Q9UJ72 324 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 MMP24Q9Y5R2 645 aa7.03□□□□□ -1.28
HPS4-205ENST00000429411 CCDC187A0A096LP49 1063 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 A0A0J9YW62 118 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 SERPINE3A8MV23 424 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 MFNGO00587 321 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 ST8SIA3O43173 380 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 JTBO76095 146 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 ADCYAP1P18509 176 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 TCN2P20062 427 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 PMP22Q01453 160 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 PNLIPRP3Q17RR3 467 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 MRPL21Q7Z2W9 205 aaKnown RBP7.02□□□□□ -1.29
HPS4-205ENST00000429411 CADM4Q8NFZ8 388 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 OR5T1Q8NG75 326 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 OR4A4PQ8NGN8 299 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 ASB13Q8WXK3 278 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 SPSB2Q99619 263 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 SMCO4Q9NRQ5 59 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 RALYQ9UKM9 306 aaKnown RBP7.02□□□□□ -1.29
HPS4-205ENST00000429411 AQP7P3A6NL99 342 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 CD37P11049 281 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 NQO2P16083 231 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 SUPT4H1P63272 117 aaKnown RBP7.02□□□□□ -1.29
HPS4-205ENST00000429411 ARL6IP1Q15041 203 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 GPR157Q5UAW9 335 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 FAHD2BQ6P2I3 314 aaPredicted RBP7.02□□□□□ -1.29
HPS4-205ENST00000429411 SLC25A47Q6Q0C1 308 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 C17orf78Q8N4C9 275 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 SUMF2Q8NBJ7 301 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 AGBL5Q8NDL9 886 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 OR2G3Q8NGZ4 309 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 ABHD3Q8WU67 409 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 WBP1Q96G27 269 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 FAHD2AQ96GK7 314 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 SF3B5Q9BWJ5 86 aaKnown RBP7.02□□□□□ -1.29
HPS4-205ENST00000429411 SLC2A8Q9NY64 477 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 PISDQ9UG56 409 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 RFNGQ9Y644 331 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 EIF1BO60739 113 aaKnown RBP7.02□□□□□ -1.29
HPS4-205ENST00000429411 MRPL33O75394 65 aaKnown RBP7.02□□□□□ -1.29
HPS4-205ENST00000429411 IL2RAP01589 272 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 ACKR3P25106 362 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 CALCRP30988 508 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 THBS4P35443 961 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 GUK1Q16774 197 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 SOHLH1Q5JUK2 328 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 SPATA46Q5T0L3 261 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 UQCC3Q6UW78 93 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 ZNF441Q8N8Z8 693 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 SFT2D1Q8WV19 159 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 PP6455Q8WZ26 134 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 TAAR9Q96RI9 348 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 DUSP23Q9BVJ7 150 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 SCNM1Q9BWG6 230 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 MRPL13Q9BYD1 178 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms