RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 H1FXQ92522 213 aaKnown RBP7.47□□□□□ -1.21
SMC1A-203ENST00000428014 GCDHQ92947 438 aaPredicted RBP7.47□□□□□ -1.21
SMC1A-203ENST00000428014 MALSU1Q96EH3 234 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 AJUBAQ96IF1 538 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 ZNF714Q96N38 554 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 YTHDF1Q9BYJ9 559 aaKnown RBP7.47□□□□□ -1.21
SMC1A-203ENST00000428014 GAL3ST2Q9H3Q3 398 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 C19orf12Q9NSK7 152 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 OR6C3Q9NZP0 311 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 ONECUT1Q9UBC0 465 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 DUX4Q9UBX2 424 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 LSM2Q9Y333 95 aaKnown RBP7.47□□□□□ -1.21
SMC1A-203ENST00000428014 ANK2Q01484 3957 aa7.47□□□□□ -1.21
SMC1A-203ENST00000428014 TMEM82A0PJX8 343 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 BTBD17A6NE02 478 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 A6NIN4 97 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 ODF3BA8MYP8 253 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 OOSP1A8MZH6 123 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 F8VVB4 439 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 F8VWA3 439 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 WIPF1O43516 503 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 PSPNO60542 156 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 OR2H2O95918 312 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 LALBAP00709 142 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 HCKP08631 526 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 UBBP0CG47 229 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 SELLP14151 372 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 C21orf33P30042 268 aaPredicted RBP7.46□□□□□ -1.22
SMC1A-203ENST00000428014 ZNF93P35789 620 aaPredicted RBP7.46□□□□□ -1.22
SMC1A-203ENST00000428014 TGFBR2P37173 567 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 RBMXP38159 391 aaKnown RBP7.46□□□□□ -1.22
SMC1A-203ENST00000428014 NPBWR2P48146 333 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 POU3F4P49335 361 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 GTF2A1P52655 376 aaPredicted RBP7.46□□□□□ -1.22
SMC1A-203ENST00000428014 CAPZA1P52907 286 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 ACTG1P63261 375 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 TPBGQ13641 420 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 SPHARQ15513 63 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 RBM48Q5RL73 367 aaKnown RBP7.46□□□□□ -1.22
SMC1A-203ENST00000428014 ZNF626Q68DY1 528 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 XAF1Q6GPH4 301 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 HCP5Q6MZN7 132 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 Q6P435 159 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 C12orf54Q6X4T0 127 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 AHSA2Q719I0 299 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 BCL6BQ8N143 479 aaPredicted RBP7.46□□□□□ -1.22
SMC1A-203ENST00000428014 ZNF565Q8N9K5 539 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 ASCC1Q8N9N2 400 aaKnown RBP7.46□□□□□ -1.22
SMC1A-203ENST00000428014 OR4F5Q8NH21 305 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 SGMS2Q8NHU3 365 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 LHX4Q969G2 390 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 SLAMF9Q96A28 289 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 ZNF488Q96MN9 340 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 ZNF747Q9BV97 191 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 METTL9Q9H1A3 318 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 RANBP3Q9H6Z4 567 aaPredicted RBP7.46□□□□□ -1.22
SMC1A-203ENST00000428014 RAB9BQ9NP90 201 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 RBFOX1Q9NWB1 397 aaKnown RBP7.46□□□□□ -1.22
SMC1A-203ENST00000428014 CLEC2DQ9UHP7 191 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 FAM96BQ9Y3D0 163 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 SIRT4Q9Y6E7 314 aaPredicted RBP7.46□□□□□ -1.22
SMC1A-203ENST00000428014 FBN3Q75N90 2809 aa7.46□□□□□ -1.22
SMC1A-203ENST00000428014 TENM1Q9UKZ4 2725 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 TRGV10A0A0A0MS01 117 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 A0A0G2JK05 382 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 A6NHS1 94 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 ZNF729A6NN14 1252 aaPredicted RBP7.45□□□□□ -1.22
SMC1A-203ENST00000428014 GABRPO00591 440 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 XPNPEP2O43895 674 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 TSPAN9O75954 239 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 CGB3P0DN86 165 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 CGB7P0DN87 165 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 IGHV1-8P0DP01 117 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 TMEM225BP0DP42 221 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 GTF2F2P13984 249 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 PRKACAP17612 351 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 CELP19835 753 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 BCL3P20749 454 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 CRHBPP24387 322 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 CFPP27918 469 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 SAA4P35542 130 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 OR3A1P47881 315 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 AQP4P55087 323 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 GABARAPL2P60520 117 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 MLLT11Q13015 90 aaPredicted RBP7.45□□□□□ -1.22
SMC1A-203ENST00000428014 TBCEQ15813 527 aaPredicted RBP7.45□□□□□ -1.22
SMC1A-203ENST00000428014 GRK1Q15835 563 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 SHISA2Q6UWI4 295 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 IZUMO2Q6UXV1 221 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 BRD3OSQ6XYD6 125 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 GAPTQ8N292 157 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 C8orf31Q8N9H6 132 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 BPIFB6Q8NFQ5 453 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 OR52N4Q8NGI2 321 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 DERL3Q96Q80 235 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 S100A13Q99584 98 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 ZNF184Q99676 751 aaPredicted RBP7.45□□□□□ -1.22
SMC1A-203ENST00000428014 BARHL1Q9BZE3 327 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 C16orf95Q9H693 158 aa7.45□□□□□ -1.22
SMC1A-203ENST00000428014 RCC2Q9P258 522 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms