RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 NUP62P37198 522 aaPredicted RBP11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 TMEM187Q14656 261 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 GGNBP1Q5YKI7 109 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 C5orf24Q7Z6I8 188 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 PDZD9Q8IXQ8 264 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 WDR31Q8NA23 367 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 C1orf162Q8NEQ5 155 aaPredicted RBP11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 MRPL24Q96A35 216 aaKnown RBP11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 DMRTA2Q96SC8 542 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 PRRX2Q99811 253 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 RSRP1Q9BUV0 290 aa11.94□□□□□ -0.5
APOBEC3D-202ENST00000427494 CNOT1A5YKK6 2376 aaKnown RBP11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 LRP5LA4QPB2 252 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 HS3ST1O14792 307 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 BET1O15155 118 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 PDGFAP04085 211 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 SCTP09683 121 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 IL15RAQ13261 267 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 ALKBH6Q3KRA9 238 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 FAM74A1Q5RGS3 127 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 IGFL3Q6UXB1 125 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 UNQ6126/PRO20091Q6UXV3 157 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 WDR86Q86TI4 376 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 CXorf67Q86X51 503 aaPredicted RBP11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 CCDC71LQ8N9Z2 235 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 OR11L1Q8NGX0 322 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 OR1S1Q8NH92 325 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 RDH5Q92781 318 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 RBPMSQ93062 196 aaKnown RBP11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 GALNT14Q96FL9 552 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 SUCNR1Q9BXA5 334 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 SLC25A32Q9H2D1 315 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 PLSCR4Q9NRQ2 329 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 SDHAF2Q9NX18 166 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 PFDN2Q9UHV9 154 aa11.93□□□□□ -0.5
APOBEC3D-202ENST00000427494 IQCF6A8MYZ5 107 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 TRDCB7Z8K6 153 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 KLK10O43240 276 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 WDR1O75083 606 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 DIRAS3O95661 229 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 SELEP16581 610 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 FOXRED2Q8IWF2 684 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 ZNF610Q8N9Z0 462 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 SCCPDHQ8NBX0 429 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 ANGPTL6Q8NI99 470 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 MARVELD3Q96A59 401 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 SYT3Q9BQG1 590 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 REG4Q9BYZ8 158 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 OPN3Q9H1Y3 402 aaPredicted RBP11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 RIMS4Q9H426 269 aaPredicted RBP11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 MED9Q9NWA0 146 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 RASL12Q9NYN1 266 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 DKK4Q9UBT3 224 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 PROCRQ9UNN8 238 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 TRAV24A0A0B4J272 114 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 KIR2DS1A0A191URI9 304 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 MSGN1A6NI15 193 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 IGKV3-15P01624 115 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 TK1P04183 234 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 MPV17P39210 176 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 KIR2DS4P43632 304 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 PSG7Q13046 419 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 KIR2DS1Q14954 304 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 CCDC28AQ8IWP9 274 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 MRPL30Q8TCC3 161 aaKnown RBP11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 PHYHIPLQ96FC7 376 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 BOD1Q96IK1 185 aa11.92□□□□□ -0.5
APOBEC3D-202ENST00000427494 ZNF292O60281 2723 aa11.91□□□□□ -0.5
APOBEC3D-202ENST00000427494 MFSD2BA6NFX1 497 aa11.91□□□□□ -0.5
APOBEC3D-202ENST00000427494 DEGS1O15121 323 aa11.91□□□□□ -0.5
APOBEC3D-202ENST00000427494 PHF1O43189 567 aaPredicted RBP11.91□□□□□ -0.5
APOBEC3D-202ENST00000427494 TNFSF13O75888 250 aa11.91□□□□□ -0.5
APOBEC3D-202ENST00000427494 SLC34A2O95436 690 aa11.91□□□□□ -0.5
APOBEC3D-202ENST00000427494 GLI4P10075 376 aa11.91□□□□□ -0.5
APOBEC3D-202ENST00000427494 ZNF44P15621 663 aa11.91□□□□□ -0.5
APOBEC3D-202ENST00000427494 ZNF250P15622 560 aa11.91□□□□□ -0.5
APOBEC3D-202ENST00000427494 HERPUD1Q15011 391 aa11.91□□□□□ -0.5
APOBEC3D-202ENST00000427494 OR8G1Q15617 311 aa11.91□□□□□ -0.5
APOBEC3D-202ENST00000427494 LIAT1Q6ZQX7 453 aa11.91□□□□□ -0.5
APOBEC3D-202ENST00000427494 KLF14Q8TD94 323 aaPredicted RBP11.91□□□□□ -0.5
APOBEC3D-202ENST00000427494 GTF3AQ92664 365 aaKnown RBP11.91□□□□□ -0.5
APOBEC3D-202ENST00000427494 STARD4Q96DR4 205 aa11.91□□□□□ -0.5
APOBEC3D-202ENST00000427494 RHOFQ9HBH0 211 aa11.91□□□□□ -0.5
APOBEC3D-202ENST00000427494 TUBD1Q9UJT1 453 aa11.91□□□□□ -0.5
APOBEC3D-202ENST00000427494 POLDIP2Q9Y2S7 368 aa11.91□□□□□ -0.5
APOBEC3D-202ENST00000427494 ATP23Q9Y6H3 246 aa11.91□□□□□ -0.5
APOBEC3D-202ENST00000427494 IGHV3-64DA0A0J9YX35 117 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 H0YL77 283 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 TEX46H3BTG2 121 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 EIF2S3P41091 472 aaKnown RBP11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 FAM76BQ5HYJ3 339 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 C20orf204Q6ZNR8 217 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 Q6ZS92 163 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 Q8IYB0 196 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 LGI3Q8N145 548 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 ZNF565Q8N9K5 539 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 SECTM1Q8WVN6 248 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 CNTNAP3BQ96NU0 1288 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 AQP10Q96PS8 301 aa11.9□□□□□ -0.5
APOBEC3D-202ENST00000427494 CNTNAP3Q9BZ76 1288 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms