RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ITGB1BP2Q9UKP3 347 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 NPTNQ9Y639 398 aa13.24□□□□□ -0.29
SHOX2-202ENST00000425436 OR5B21A6NL26 309 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 OVOL3O00110 214 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 NDUFS7O75251 213 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 IGHV3-13P01766 116 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 HRH1P35367 487 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 NKX2-5P52952 324 aaPredicted RBP13.23□□□□□ -0.29
SHOX2-202ENST00000425436 NKPD1Q17RQ9 610 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 ELP2Q6IA86 826 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 GVQW1Q8N7I0 195 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 OR4S1Q8NGB4 309 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 SNAPC3Q92966 411 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 VRK1Q99986 396 aaPredicted RBP13.23□□□□□ -0.29
SHOX2-202ENST00000425436 BEX1Q9HBH7 125 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 NAV2Q8IVL1 2488 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 VPS13CQ709C8 3753 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 SPRY1O43609 319 aaPredicted RBP13.23□□□□□ -0.29
SHOX2-202ENST00000425436 TIMM8AO60220 97 aaPredicted RBP13.23□□□□□ -0.29
SHOX2-202ENST00000425436 RAC2P15153 192 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 GABRR1P24046 479 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 OR3A3P47888 321 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 SCGB2B2Q4G0G5 96 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 C4orf46Q504U0 113 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 DMRTC1Q5HYR2 192 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 ZNF573Q86YE8 665 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 BHLHE23Q8NDY6 225 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 OR5H2Q8NGV7 314 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 ZFAND1Q8TCF1 268 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 ZNF431Q8TF32 576 aaPredicted RBP13.23□□□□□ -0.29
SHOX2-202ENST00000425436 PERPQ96FX8 193 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 ZNF436Q9C0F3 470 aaPredicted RBP13.23□□□□□ -0.29
SHOX2-202ENST00000425436 DYNLRB1Q9NP97 96 aa13.23□□□□□ -0.29
SHOX2-202ENST00000425436 PURGQ9UJV8 347 aaKnown RBP13.23□□□□□ -0.29
SHOX2-202ENST00000425436 ARID1AO14497 2285 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 M0R233 179 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 FABP7O15540 132 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 ANGPTL7O43827 346 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 LILRA1O75019 489 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 GSTT2P0CG29 244 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 AMY2BP19961 511 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 DTYMKP23919 212 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 ECI1P42126 302 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 TAS2R31P59538 309 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 MPPED2Q15777 294 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 GRK1Q15835 563 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 DEFB113Q30KQ7 82 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 NHLRC3Q5JS37 347 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 TERB2Q8NHR7 220 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 NINJ1Q92982 152 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 SEC22CQ9BRL7 303 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 TEX15Q9BXT5 2789 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 MSL2Q9HCI7 577 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 GPR160Q9UJ42 338 aa13.22□□□□□ -0.29
SHOX2-202ENST00000425436 LY6HO94772 140 aa13.21□□□□□ -0.29
SHOX2-202ENST00000425436 GIPP09681 153 aaPredicted RBP13.21□□□□□ -0.29
SHOX2-202ENST00000425436 OR4E1P0C645 316 aa13.21□□□□□ -0.29
SHOX2-202ENST00000425436 VSIG10L2P0DP72 767 aa13.21□□□□□ -0.29
SHOX2-202ENST00000425436 KITLGP21583 273 aa13.21□□□□□ -0.29
SHOX2-202ENST00000425436 SNU13P55769 128 aaKnown RBP13.21□□□□□ -0.29
SHOX2-202ENST00000425436 UBE2MP61081 183 aaKnown RBP13.21□□□□□ -0.29
SHOX2-202ENST00000425436 RAP2BP61225 183 aa13.21□□□□□ -0.29
SHOX2-202ENST00000425436 GNG3P63215 75 aa13.21□□□□□ -0.29
SHOX2-202ENST00000425436 OR52W1Q6IF63 320 aa13.21□□□□□ -0.29
SHOX2-202ENST00000425436 LINC00596Q86U02 117 aa13.21□□□□□ -0.29
SHOX2-202ENST00000425436 OR13C8Q8NGS7 320 aa13.21□□□□□ -0.29
SHOX2-202ENST00000425436 CAPSLQ8WWF8 208 aa13.21□□□□□ -0.29
SHOX2-202ENST00000425436 OR5P3Q8WZ94 311 aa13.21□□□□□ -0.29
SHOX2-202ENST00000425436 ST3GAL6Q9Y274 331 aa13.21□□□□□ -0.29
SHOX2-202ENST00000425436 AKAP9Q99996 3911 aa13.21□□□□□ -0.3
SHOX2-202ENST00000425436 IGKV1-12A0A0C4DH73 117 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 PLSCR5A0PG75 271 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 ZNF732B4DXR9 585 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 SPRY3O43610 288 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 PDCD6O75340 191 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 IGKV1D-12P01611 117 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 PMP2P02689 132 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 CXCL3P19876 107 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 FUT3P21217 361 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 CHATP28329 748 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 TSPAN5P62079 268 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 TAF9Q16594 264 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 CHRFAM7AQ494W8 412 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 ATPAF1Q5TC12 328 aaPredicted RBP13.2□□□□□ -0.3
SHOX2-202ENST00000425436 Q6ZR03 302 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 SLC25A26Q70HW3 274 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 SLC25A42Q86VD7 318 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 OR5AP2Q8NGF4 316 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 EMG1Q92979 244 aaKnown RBP13.2□□□□□ -0.3
SHOX2-202ENST00000425436 MBD6Q96DN6 1003 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 ST6GALNAC5Q9BVH7 336 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 GON7Q9BXV9 100 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 PKIBQ9C010 78 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 DLL4Q9NR61 685 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 ZNF701Q9NV72 531 aaPredicted RBP13.2□□□□□ -0.3
SHOX2-202ENST00000425436 BEX4Q9NWD9 120 aaPredicted RBP13.2□□□□□ -0.3
SHOX2-202ENST00000425436 MGAT4CQ9UBM8 478 aa13.2□□□□□ -0.3
SHOX2-202ENST00000425436 ZSCAN5BA6NJL1 495 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 CEACAM18A8MTB9 384 aa13.19□□□□□ -0.3
SHOX2-202ENST00000425436 TRAPPC2LH3BP13 241 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms