RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 NXPH2O95156 264 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 GLAP06280 429 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 GLRA1P23415 457 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 GMFBP60983 142 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 SRSF7Q16629 238 aaKnown RBP eCLIP22.46■■□□□ 1.192e-8■■■□□ 15.5
LDB1-202ENST00000425280 LY6G6FQ5SQ64 297 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 POC1AQ8NBT0 407 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 RND1Q92730 232 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 USB1Q9BQ65 265 aaKnown RBP22.46■■□□□ 1.19
LDB1-202ENST00000425280 TMPRSS13Q9BYE2 586 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 DECR2Q9NUI1 292 aa22.46■■□□□ 1.19
LDB1-202ENST00000425280 NOS1APO75052 506 aaPredicted RBP22.45■■□□□ 1.18
LDB1-202ENST00000425280 DUS4LO95620 317 aaKnown RBP22.45■■□□□ 1.18
LDB1-202ENST00000425280 PGAM2P15259 253 aa22.45■■□□□ 1.18
LDB1-202ENST00000425280 ECI1P42126 302 aa22.45■■□□□ 1.18
LDB1-202ENST00000425280 PRAMEF6Q5VXH4 476 aa22.45■■□□□ 1.18
LDB1-202ENST00000425280 ZNF826PQ6ZT77 177 aa22.45■■□□□ 1.18
LDB1-202ENST00000425280 CASTOR1Q8WTX7 329 aa22.45■■□□□ 1.18
LDB1-202ENST00000425280 GTF3AQ92664 365 aaKnown RBP22.45■■□□□ 1.18
LDB1-202ENST00000425280 ZNF205O95201 554 aa22.45■■□□□ 1.18
LDB1-202ENST00000425280 IGHV3-13P01766 116 aa22.45■■□□□ 1.18
LDB1-202ENST00000425280 ZNF44P15621 663 aa22.45■■□□□ 1.18
LDB1-202ENST00000425280 CD40P25942 277 aa22.45■■□□□ 1.18
LDB1-202ENST00000425280 SNRPD2P62316 118 aaKnown RBP22.45■■□□□ 1.18
LDB1-202ENST00000425280 TMEM171Q8WVE6 324 aa22.45■■□□□ 1.18
LDB1-202ENST00000425280 PHB2Q99623 299 aa22.45■■□□□ 1.18
LDB1-202ENST00000425280 HES4Q9HCC6 221 aa22.45■■□□□ 1.18
LDB1-202ENST00000425280 LIN54Q6MZP7 749 aa22.44■■□□□ 1.18
LDB1-202ENST00000425280 VHLLQ6RSH7 139 aa22.44■■□□□ 1.18
LDB1-202ENST00000425280 UNQ6494/PRO21346Q6UXR6 183 aa22.44■■□□□ 1.18
LDB1-202ENST00000425280 ZCCHC14Q8WYQ9 949 aaKnown RBP22.44■■□□□ 1.18
LDB1-202ENST00000425280 SLC23A1Q9UHI7 598 aa22.44■■□□□ 1.18
LDB1-202ENST00000425280 CADP27708 2225 aa22.44■■□□□ 1.18
LDB1-202ENST00000425280 TRGV8A0A0C4DH27 118 aa22.43■■□□□ 1.18
LDB1-202ENST00000425280 PPP3CBP16298 524 aa22.43■■□□□ 1.18
LDB1-202ENST00000425280 RBM39Q14498 530 aaKnown RBP22.43■■□□□ 1.18
LDB1-202ENST00000425280 ZNF146Q15072 292 aa22.43■■□□□ 1.18
LDB1-202ENST00000425280 MEMO1Q9Y316 297 aa22.43■■□□□ 1.18
LDB1-202ENST00000425280 RGS13O14921 159 aa22.43■■□□□ 1.18
LDB1-202ENST00000425280 OR2H2O95918 312 aa22.43■■□□□ 1.18
LDB1-202ENST00000425280 KLF3P57682 345 aaPredicted RBP22.43■■□□□ 1.18
LDB1-202ENST00000425280 SUPT4H1P63272 117 aaKnown RBP22.43■■□□□ 1.18
LDB1-202ENST00000425280 OR5M8Q8NGP6 311 aa22.43■■□□□ 1.18
LDB1-202ENST00000425280 MRPL30Q8TCC3 161 aaKnown RBP22.43■■□□□ 1.18
LDB1-202ENST00000425280 RIMS4Q9H426 269 aaPredicted RBP22.43■■□□□ 1.18
LDB1-202ENST00000425280 C14orf166Q9Y224 244 aaKnown RBP22.43■■□□□ 1.18
LDB1-202ENST00000425280 A6NLC8 198 aa22.42■■□□□ 1.18
LDB1-202ENST00000425280 SFT2D2O95562 160 aa22.42■■□□□ 1.18
LDB1-202ENST00000425280 FCGR2CP31995 323 aa22.42■■□□□ 1.18
LDB1-202ENST00000425280 WDR82Q6UXN9 313 aa22.42■■□□□ 1.18
LDB1-202ENST00000425280 OR2Z1Q8NG97 314 aa22.42■■□□□ 1.18
LDB1-202ENST00000425280 SYT3Q9BQG1 590 aa22.42■■□□□ 1.18
LDB1-202ENST00000425280 FXYD6Q9H0Q3 95 aa22.42■■□□□ 1.18
LDB1-202ENST00000425280 UFSP2Q9NUQ7 469 aa22.42■■□□□ 1.18
LDB1-202ENST00000425280 SIRPB1O00241 398 aa22.42■■□□□ 1.18
LDB1-202ENST00000425280 IGSF11Q5DX21 431 aa22.42■■□□□ 1.18
LDB1-202ENST00000425280 SPIN3Q5JUX0 258 aa22.42■■□□□ 1.18
LDB1-202ENST00000425280 C5orf24Q7Z6I8 188 aa22.42■■□□□ 1.18
LDB1-202ENST00000425280 ASB13Q8WXK3 278 aa22.42■■□□□ 1.18
LDB1-202ENST00000425280 PIEZO1Q92508 2521 aa22.41■■□□□ 1.18
LDB1-202ENST00000425280 TRBV6-6A0A0A6YYG2 114 aa22.41■■□□□ 1.18
LDB1-202ENST00000425280 SLC33A1O00400 549 aaPredicted RBP22.41■■□□□ 1.18
LDB1-202ENST00000425280 WNT9BO14905 357 aa22.41■■□□□ 1.18
LDB1-202ENST00000425280 SLC34A2O95436 690 aa22.41■■□□□ 1.18
LDB1-202ENST00000425280 THBDP07204 575 aa22.41■■□□□ 1.18
LDB1-202ENST00000425280 CTSDP07339 412 aaPredicted RBP22.41■■□□□ 1.18
LDB1-202ENST00000425280 HLA-GP17693 338 aa22.41■■□□□ 1.18
LDB1-202ENST00000425280 RPS23P62266 143 aaKnown RBP22.41■■□□□ 1.18
LDB1-202ENST00000425280 MZT1Q08AG7 82 aa22.41■■□□□ 1.18
LDB1-202ENST00000425280 CLEC18BQ6UXF7 455 aa22.41■■□□□ 1.18
LDB1-202ENST00000425280 C20orf204Q6ZNR8 217 aa22.41■■□□□ 1.18
LDB1-202ENST00000425280 WFDC8Q8IUA0 241 aa22.41■■□□□ 1.18
LDB1-202ENST00000425280 ASCC1Q8N9N2 400 aaKnown RBP22.41■■□□□ 1.18
LDB1-202ENST00000425280 DHRS9Q9BPW9 319 aa22.41■■□□□ 1.18
LDB1-202ENST00000425280 NCOR2Q9Y618 2525 aa22.4■■□□□ 1.18
LDB1-202ENST00000425280 IGLV3-9A0A075B6K5 115 aa22.4■■□□□ 1.18
LDB1-202ENST00000425280 ZSCAN5BA6NJL1 495 aa22.4■■□□□ 1.18
LDB1-202ENST00000425280 CCSO14618 274 aa22.4■■□□□ 1.18
LDB1-202ENST00000425280 SH2D1BO14796 132 aa22.4■■□□□ 1.18
LDB1-202ENST00000425280 RPS2P15880 293 aaKnown RBP22.4■■□□□ 1.18
LDB1-202ENST00000425280 PAN3Q58A45 887 aaKnown RBP22.4■■□□□ 1.18
LDB1-202ENST00000425280 LPCAT3Q6P1A2 487 aa22.4■■□□□ 1.18
LDB1-202ENST00000425280 KCTD9Q7L273 389 aa22.4■■□□□ 1.18
LDB1-202ENST00000425280 DBX1A6NMT0 343 aa22.4■■□□□ 1.18
LDB1-202ENST00000425280 KNG1P01042 644 aa22.4■■□□□ 1.18
LDB1-202ENST00000425280 GLP1RP43220 463 aa22.4■■□□□ 1.18
LDB1-202ENST00000425280 SLC9A3R2Q15599 337 aa22.4■■□□□ 1.18
LDB1-202ENST00000425280 TMEM108Q6UXF1 575 aa22.4■■□□□ 1.18
LDB1-202ENST00000425280 ST6GALNAC3Q8NDV1 305 aa22.4■■□□□ 1.18
LDB1-202ENST00000425280 SLA2Q9H6Q3 261 aa22.4■■□□□ 1.18
LDB1-202ENST00000425280 TRDCB7Z8K6 153 aa22.39■■□□□ 1.17
LDB1-202ENST00000425280 RGS11O94810 467 aa22.39■■□□□ 1.17
LDB1-202ENST00000425280 SCTP09683 121 aa22.39■■□□□ 1.17
LDB1-202ENST00000425280 ZNF728P0DKX0 622 aa22.39■■□□□ 1.17
LDB1-202ENST00000425280 CD200P41217 278 aa22.39■■□□□ 1.17
LDB1-202ENST00000425280 CASP6P55212 293 aa22.39■■□□□ 1.17
LDB1-202ENST00000425280 HOXA4Q00056 320 aaPredicted RBP22.39■■□□□ 1.17
LDB1-202ENST00000425280 LGALSLQ3ZCW2 172 aaPredicted RBP22.39■■□□□ 1.17
LDB1-202ENST00000425280 FIP1L1Q6UN15 594 aaKnown RBP22.39■■□□□ 1.17
LDB1-202ENST00000425280 TOMM40LQ969M1 308 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms