RNA–Protein interactions for RNA: ENST00000422797.5

LIMS1-207, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene LIMS1, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-207ENST00000422797 LCATP04180 440 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 ARG1P05089 322 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 UCP1P25874 307 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 GLIPR1P48060 266 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 RRADP55042 308 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 RAC3P60763 192 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 PHYHD1Q5SRE7 291 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 RAET1LQ5VY80 246 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 SP5Q6BEB4 398 aaPredicted RBP9.53□□□□□ -0.88
LIMS1-207ENST00000422797 SPSB3Q6PJ21 355 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 LINC00596Q86U02 117 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 ZNF429Q86V71 674 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 CMTM1Q8IZ96 169 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 OR5D13Q8NGL4 314 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 M1APQ8TC57 530 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 MR1Q95460 341 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 RAB39BQ96DA2 213 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 ZNF385AQ96PM9 386 aaKnown RBP9.53□□□□□ -0.88
LIMS1-207ENST00000422797 OR6C1Q96RD1 312 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 GGACTQ9BVM4 153 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 ZNF700Q9H0M5 742 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 ZNF442Q9H7R0 627 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 TMEM38BQ9NVV0 291 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 WSB1Q9Y6I7 421 aa9.53□□□□□ -0.88
LIMS1-207ENST00000422797 IGKV1-27A0A075B6S5 117 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 NKX2-6A6NCS4 301 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 ZNF587BE7ETH6 402 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 H0Y980 276 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 GEMIN2O14893 280 aaKnown RBP9.52□□□□□ -0.88
LIMS1-207ENST00000422797 BCAT2O15382 392 aaPredicted RBP9.52□□□□□ -0.88
LIMS1-207ENST00000422797 ANGPTL7O43827 346 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 CBR3O75828 277 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 IFNA5P01569 189 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 OPN1LWP04000 364 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 DAOP14920 347 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 FHITP49789 147 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 TAS2R30P59541 319 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 NKX6-1P78426 367 aaPredicted RBP9.52□□□□□ -0.88
LIMS1-207ENST00000422797 ID3Q02535 119 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 MPV17LQ2QL34 196 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 PLCXD3Q63HM9 321 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 MRPL14Q6P1L8 145 aaKnown RBP9.52□□□□□ -0.88
LIMS1-207ENST00000422797 MEX3BQ6ZN04 569 aaKnown RBP9.52□□□□□ -0.88
LIMS1-207ENST00000422797 PPP1R3BQ86XI6 285 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 H1FOOQ8IZA3 346 aaPredicted RBP9.52□□□□□ -0.88
LIMS1-207ENST00000422797 SELENOHQ8IZQ5 122 aaKnown RBP9.52□□□□□ -0.88
LIMS1-207ENST00000422797 SLC25A45Q8N413 288 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 DEFB119Q8N690 84 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 IL22RA1Q8N6P7 574 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 CPNE4Q96A23 557 aaPredicted RBP9.52□□□□□ -0.88
LIMS1-207ENST00000422797 SPSB4Q96A44 273 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 RAB40CQ96S21 281 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 TP53RKQ96S44 253 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 P2RX4Q99571 388 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 CTDSP1Q9GZU7 261 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 PLK3Q9H4B4 646 aa9.52□□□□□ -0.88
LIMS1-207ENST00000422797 A0A1B0GU03 582 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 FAM24AA6NFZ4 105 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 ZNF724A8MTY0 619 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 PPP1R2P9O14990 202 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 C1QL1O75973 258 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 IFNA1P01562 189 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 IFNA10P01566 189 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 DBHP09172 617 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 SSR4P51571 173 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 RPL23AP62750 156 aaKnown RBP9.51□□□□□ -0.89
LIMS1-207ENST00000422797 HLA-DRB3P79483 266 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 PMS2P11Q13670 270 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 ICAM4Q14773 271 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 PCOLCEQ15113 449 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 ZNF674Q2M3X9 581 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 PIGYQ3MUY2 71 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 NMSQ5H8A3 153 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 ACER2Q5QJU3 275 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 TSPO2Q5TGU0 170 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 TBC1D26Q86UD7 250 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 C1orf87Q8N0U7 546 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 ZIC4Q8N9L1 334 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 OR5C1Q8NGR4 320 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 PFDN5Q99471 154 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 PSMG3Q9BT73 122 aaPredicted RBP9.51□□□□□ -0.89
LIMS1-207ENST00000422797 PARD6GQ9BYG4 376 aaPredicted RBP9.51□□□□□ -0.89
LIMS1-207ENST00000422797 PRDM14Q9GZV8 571 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 GFOD1Q9NXC2 390 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 TRBV6-6A0A0A6YYG2 114 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 LOC102723971A0A1B0GUV8 181 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 SSSCA1O60232 199 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 TUSC2O75896 110 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 SRD5A2P31213 254 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 RND2P52198 227 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 SSTP61278 116 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 DLK1P80370 383 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 IL11RAQ14626 422 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 RNPS1Q15287 305 aaKnown RBP9.51□□□□□ -0.89
LIMS1-207ENST00000422797 ELOBQ15370 118 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 PRAMEF20Q5VT98 475 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 ZNF774Q6NX45 483 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 CLEC9AQ6UXN8 241 aa9.51□□□□□ -0.89
LIMS1-207ENST00000422797 ZFP62Q8NB50 900 aaPredicted RBP9.51□□□□□ -0.89
LIMS1-207ENST00000422797 OR11L1Q8NGX0 322 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms