RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 MPPED1O15442 326 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 ARG1P05089 322 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 GDF1P27539 372 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 GNRHRP30968 328 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 OR4D5Q8NGN0 318 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 HLA-CQ95604 372 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 ADGRG7Q96K78 797 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 RARRES2Q99969 163 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 ASPMQ8IZT6 3477 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 A0A1W2PPE3 182 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 UMAD1C9J7I0 102 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 SCTP09683 121 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 MEOX2P50222 304 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 SRYQ05066 204 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 IL13RA2Q14627 380 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 GPR157Q5UAW9 335 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 RBMS3Q6XE24 437 aaKnown RBP13.6□□□□□ -0.23
CDH1-202ENST00000422392 C15orf54Q8N8G6 183 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 OR2V1Q8NHB1 315 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 CD300LFQ8TDQ1 290 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 BOD1Q96IK1 185 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 SGCZQ96LD1 299 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 PAPOLGQ9BWT3 736 aaKnown RBP13.6□□□□□ -0.23
CDH1-202ENST00000422392 FGF23Q9GZV9 251 aaPredicted RBP13.6□□□□□ -0.23
CDH1-202ENST00000422392 RNF122Q9H9V4 155 aa13.6□□□□□ -0.23
CDH1-202ENST00000422392 FBXO9Q9UK97 447 aaPredicted RBP13.6□□□□□ -0.23
CDH1-202ENST00000422392 hCG_1809904A0A1W2PP81 198 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 A0A1W2PR64 198 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 A0A1W2PRV1 198 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 MMP7P09237 267 aaPredicted RBP13.59□□□□□ -0.23
CDH1-202ENST00000422392 PTAFRP25105 342 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 ITGA3P26006 1051 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 FOXG1P55316 489 aaPredicted RBP13.59□□□□□ -0.23
CDH1-202ENST00000422392 ABLIM2Q6H8Q1 611 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 TBC1D26Q86UD7 250 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 OR56B2PQ8NGI1 322 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 EXTL1Q92935 676 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 PARPBPQ9NWS1 579 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 IL36GQ9NZH8 169 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 DSPP15924 2871 aaKnown RBP13.59□□□□□ -0.23
CDH1-202ENST00000422392 PQLC2LA1A4F0 135 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 IGSF23A1L1A6 192 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 CDRT15L2A8MXV6 281 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 NTN3O00634 580 aaPredicted RBP13.59□□□□□ -0.23
CDH1-202ENST00000422392 SSSCA1O60232 199 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 HAAOP46952 286 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 GPM6AP51674 278 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 RAB5BP61020 215 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 ZFP36L1Q07352 338 aaKnown RBP13.59□□□□□ -0.23
CDH1-202ENST00000422392 GNMTQ14749 295 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 CXorf66Q5JRM2 361 aaPredicted RBP13.59□□□□□ -0.23
CDH1-202ENST00000422392 ZNF818PQ6ZRF7 136 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 PPP1R32Q7Z5V6 425 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 OR2C3Q8N628 320 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 CCDC71LQ8N9Z2 235 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 KCNE4Q8WWG9 221 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 TMED3Q9Y3Q3 217 aa13.59□□□□□ -0.23
CDH1-202ENST00000422392 KIAA2026Q5HYC2 2103 aa13.58□□□□□ -0.24
CDH1-202ENST00000422392 IGKV1D-13A0A0B4J2D9 117 aa13.58□□□□□ -0.24
CDH1-202ENST00000422392 DNPH1O43598 174 aa13.58□□□□□ -0.24
CDH1-202ENST00000422392 PDGFBP01127 241 aaPredicted RBP13.58□□□□□ -0.24
CDH1-202ENST00000422392 ACAA1P09110 424 aaPredicted RBP13.58□□□□□ -0.24
CDH1-202ENST00000422392 IGKV1-13P0DP09 117 aa13.58□□□□□ -0.24
CDH1-202ENST00000422392 CCL20P78556 96 aa13.58□□□□□ -0.24
CDH1-202ENST00000422392 TSC22D1Q15714 1073 aa13.58□□□□□ -0.24
CDH1-202ENST00000422392 TMEM211Q6ICI0 200 aa13.58□□□□□ -0.24
CDH1-202ENST00000422392 ZNF100Q8IYN0 542 aa13.58□□□□□ -0.24
CDH1-202ENST00000422392 ZFP62Q8NB50 900 aaPredicted RBP13.58□□□□□ -0.24
CDH1-202ENST00000422392 UBE2J1Q9Y385 318 aaPredicted RBP13.58□□□□□ -0.24
CDH1-202ENST00000422392 A0A1W2PPE2 198 aa13.58□□□□□ -0.24
CDH1-202ENST00000422392 TNFSF12O43508 249 aa13.58□□□□□ -0.24
CDH1-202ENST00000422392 UCP3P55916 312 aa13.58□□□□□ -0.24
CDH1-202ENST00000422392 SPINK14Q6IE38 97 aa13.58□□□□□ -0.24
CDH1-202ENST00000422392 GAPTQ8N292 157 aa13.58□□□□□ -0.24
CDH1-202ENST00000422392 FAM24BQ8N5W8 94 aa13.58□□□□□ -0.24
CDH1-202ENST00000422392 TMEM171Q8WVE6 324 aa13.58□□□□□ -0.24
CDH1-202ENST00000422392 TMEM222Q9H0R3 208 aa13.58□□□□□ -0.24
CDH1-202ENST00000422392 MED13Q9UHV7 2174 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 ZNF724A8MTY0 619 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 C1orf196B1AJZ1 125 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 CST7O76096 145 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 HLA-HP01893 362 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 NKX2-1P43699 371 aaPredicted RBP13.57□□□□□ -0.24
CDH1-202ENST00000422392 UCP2P55851 309 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 HERPUD1Q15011 391 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 ACER2Q5QJU3 275 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 ZNF695Q8IW36 515 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 TMEM217Q8N7C4 229 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 EGLN1Q9GZT9 426 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 SMOC1Q9H4F8 434 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 MED12LQ86YW9 2145 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 KNTC1P50748 2209 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 ZNF503-AS2A6NEH8 195 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 TRDCB7Z8K6 153 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 HSD17B6O14756 317 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 ADAM20O43506 726 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 FOLR2P14207 255 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 ATP6V0CP27449 155 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 PCBD1P61457 104 aa13.57□□□□□ -0.24
CDH1-202ENST00000422392 DPPA2Q7Z7J5 298 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms