RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 RAB12Q6IQ22 244 aa10.65□□□□□ -0.7
ATG4B-208ENST00000419606 LINC00596Q86U02 117 aa10.65□□□□□ -0.7
ATG4B-208ENST00000419606 CIARTQ8N365 385 aaPredicted RBP10.65□□□□□ -0.7
ATG4B-208ENST00000419606 SPICQ8N5J4 248 aa10.65□□□□□ -0.7
ATG4B-208ENST00000419606 TPRX1Q8N7U7 411 aa10.65□□□□□ -0.7
ATG4B-208ENST00000419606 CHST4Q8NCG5 386 aa10.65□□□□□ -0.7
ATG4B-208ENST00000419606 OR4M1Q8NGD0 313 aa10.65□□□□□ -0.7
ATG4B-208ENST00000419606 OR56B1Q8NGI3 324 aa10.65□□□□□ -0.7
ATG4B-208ENST00000419606 SULT4A1Q9BR01 284 aa10.65□□□□□ -0.7
ATG4B-208ENST00000419606 FAAP24Q9BTP7 215 aa10.65□□□□□ -0.7
ATG4B-208ENST00000419606 DPCDQ9BVM2 203 aaPredicted RBP10.65□□□□□ -0.7
ATG4B-208ENST00000419606 DNTTIP1Q9H147 329 aa10.65□□□□□ -0.7
ATG4B-208ENST00000419606 IFT22Q9H7X7 185 aa10.65□□□□□ -0.7
ATG4B-208ENST00000419606 SEBOXQ9HB31 216 aaPredicted RBP10.65□□□□□ -0.7
ATG4B-208ENST00000419606 MIOXQ9UGB7 285 aa10.65□□□□□ -0.7
ATG4B-208ENST00000419606 GLS2Q9UI32 602 aa10.65□□□□□ -0.7
ATG4B-208ENST00000419606 PCDHB10Q9UN67 800 aa10.65□□□□□ -0.7
ATG4B-208ENST00000419606 KCNK7Q9Y2U2 307 aa10.65□□□□□ -0.7
ATG4B-208ENST00000419606 CR1P17927 2039 aa10.65□□□□□ -0.71
ATG4B-208ENST00000419606 MAST4O15021 2626 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 TRAV18A0A075B6X5 111 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 METTL21EPA6NDL7 271 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 FAM90A10PA6NDY2 464 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 FAM90A18PA6NE21 464 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 FAM90A16PA6NEW6 464 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 FAM90A20PA6NIJ5 464 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 FAM90A8PA6NJQ4 464 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 FAM90A7PA6NKC0 464 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 FAM90A22PA8MWA6 464 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 FAM90A12PA8MX19 464 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 FAM90A5PA8MXJ8 464 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 FAM90A23PA8MXZ1 464 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 FAM157AC9JC47 383 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 K7N7A8 449 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 PHF1O43189 567 aaPredicted RBP10.64□□□□□ -0.71
ATG4B-208ENST00000419606 NDUFA2O43678 99 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 APOA1P02647 267 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 FAM90A15PP0C7V4 464 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 FAM90A13PP0C7W8 464 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 FAM90A14PP0C7W9 464 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 FAM90A24PP0C7X0 464 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 GNB3P16520 340 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 FUT3P21217 361 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 ZFP36P26651 326 aaKnown RBP10.64□□□□□ -0.71
ATG4B-208ENST00000419606 TNFSF8P32971 234 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 AESQ08117 197 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 GRK1Q15835 563 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 Q6ZTK2 550 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 SLC36A1Q7Z2H8 476 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 ZNF561Q8N587 486 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 NEIL1Q96FI4 390 aaPredicted RBP10.64□□□□□ -0.71
ATG4B-208ENST00000419606 S100A16Q96FQ6 103 aaKnown RBP10.64□□□□□ -0.71
ATG4B-208ENST00000419606 MED30Q96HR3 178 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 SNX22Q96L94 193 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 NEDD4LQ96PU5 975 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 HDHD3Q9BSH5 251 aaPredicted RBP10.64□□□□□ -0.71
ATG4B-208ENST00000419606 REG4Q9BYZ8 158 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 MMP27Q9H306 513 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 CCDC168Q8NDH2 2452 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 ABCA2Q9BZC7 2435 aa10.64□□□□□ -0.71
ATG4B-208ENST00000419606 ARHGAP32A7KAX9 2087 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 TRAV39A0A0B4J263 110 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 MFNGO00587 321 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 NDUFB3O43676 98 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 CLPXO76031 633 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 HIST1H1DP16402 221 aaKnown RBP10.63□□□□□ -0.71
ATG4B-208ENST00000419606 NDUFB7P17568 137 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 USF1P22415 310 aaPredicted RBP10.63□□□□□ -0.71
ATG4B-208ENST00000419606 EDDM3AQ14507 147 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 ZNF260Q3ZCT1 412 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 CDNFQ49AH0 187 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 WDR25Q64LD2 544 aaPredicted RBP10.63□□□□□ -0.71
ATG4B-208ENST00000419606 CNIH2Q6PI25 160 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 Q6ZPA2 131 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 C5orf24Q7Z6I8 188 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 OR8H2Q8N162 312 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 OR8B3Q8NGG8 313 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 OR6Q1Q8NGQ2 317 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 NEK7Q8TDX7 302 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 RAB40AQ8WXH6 277 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 ST8SIA4Q92187 359 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 GCDHQ92947 438 aaPredicted RBP10.63□□□□□ -0.71
ATG4B-208ENST00000419606 RAB3CQ96E17 227 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 COQ2Q96H96 371 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 CMTM3Q96MX0 182 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 OR8B2Q96RD0 313 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 DCTN5Q9BTE1 182 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 PLEKHJ1Q9NW61 149 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 PTTG2Q9NZH5 202 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 EXTL2Q9UBQ6 330 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 SLC25A10Q9UBX3 287 aaPredicted RBP10.63□□□□□ -0.71
ATG4B-208ENST00000419606 AK3Q9UIJ7 227 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 A3GALT2U3KPV4 340 aa10.63□□□□□ -0.71
ATG4B-208ENST00000419606 YLPM1P49750 1951 aaKnown RBP10.63□□□□□ -0.71
ATG4B-208ENST00000419606 ITPR3Q14573 2671 aa10.62□□□□□ -0.71
ATG4B-208ENST00000419606 TMEM235A6NFC5 223 aa10.62□□□□□ -0.71
ATG4B-208ENST00000419606 KIAA1324LA8MWY0 1029 aaPredicted RBP10.62□□□□□ -0.71
ATG4B-208ENST00000419606 MCRIP1C9JLW8 97 aa10.62□□□□□ -0.71
ATG4B-208ENST00000419606 XRCC3O43542 346 aa10.62□□□□□ -0.71
ATG4B-208ENST00000419606 HLA-DQB1P01920 261 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms