RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 OR8B8Q15620 311 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 TSC22D1Q15714 1073 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 CXorf66Q5JRM2 361 aaPredicted RBP12.47□□□□□ -0.41
HDAC9-208ENST00000417496 ACER2Q5QJU3 275 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 OR56B2PQ8NGI1 322 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 RARRES2Q99969 163 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 GINS3Q9BRX5 216 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 RGCCQ9H4X1 137 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 LUZP4Q9P127 313 aa12.47□□□□□ -0.41
HDAC9-208ENST00000417496 GPR179Q6PRD1 2367 aa12.46□□□□□ -0.41
HDAC9-208ENST00000417496 A6NLC8 198 aa12.46□□□□□ -0.41
HDAC9-208ENST00000417496 GLAP06280 429 aa12.46□□□□□ -0.41
HDAC9-208ENST00000417496 CELA3AP09093 270 aa12.46□□□□□ -0.41
HDAC9-208ENST00000417496 MMP7P09237 267 aaPredicted RBP12.46□□□□□ -0.41
HDAC9-208ENST00000417496 ZNF44P15621 663 aa12.46□□□□□ -0.41
HDAC9-208ENST00000417496 KRBOX4Q5JUW0 171 aa12.46□□□□□ -0.41
HDAC9-208ENST00000417496 OR4D5Q8NGN0 318 aa12.46□□□□□ -0.41
HDAC9-208ENST00000417496 CD300LFQ8TDQ1 290 aa12.46□□□□□ -0.41
HDAC9-208ENST00000417496 EXTL1Q92935 676 aa12.46□□□□□ -0.41
HDAC9-208ENST00000417496 HIST1H2BAQ96A08 127 aa12.46□□□□□ -0.41
HDAC9-208ENST00000417496 RSRP1Q9BUV0 290 aa12.46□□□□□ -0.41
HDAC9-208ENST00000417496 A0A1W2PPE3 182 aa12.46□□□□□ -0.42
HDAC9-208ENST00000417496 ZNF503-AS2A6NEH8 195 aa12.46□□□□□ -0.42
HDAC9-208ENST00000417496 TNFSF12O43508 249 aa12.46□□□□□ -0.42
HDAC9-208ENST00000417496 ITGA3P26006 1051 aa12.46□□□□□ -0.42
HDAC9-208ENST00000417496 CCL20P78556 96 aa12.46□□□□□ -0.42
HDAC9-208ENST00000417496 EWSR1Q01844 656 aaKnown RBP eCLIP12.46□□□□□ -0.42
HDAC9-208ENST00000417496 IGFBP7Q16270 282 aa12.46□□□□□ -0.42
HDAC9-208ENST00000417496 LPAL2Q16609 132 aa12.46□□□□□ -0.42
HDAC9-208ENST00000417496 GPR157Q5UAW9 335 aa12.46□□□□□ -0.42
HDAC9-208ENST00000417496 ZNF818PQ6ZRF7 136 aa12.46□□□□□ -0.42
HDAC9-208ENST00000417496 TBC1D26Q86UD7 250 aa12.46□□□□□ -0.42
HDAC9-208ENST00000417496 KCNE4Q8WWG9 221 aa12.46□□□□□ -0.42
HDAC9-208ENST00000417496 PARPBPQ9NWS1 579 aa12.46□□□□□ -0.42
HDAC9-208ENST00000417496 UBE2J1Q9Y385 318 aaPredicted RBP12.46□□□□□ -0.42
HDAC9-208ENST00000417496 KPTNQ9Y664 436 aa12.46□□□□□ -0.42
HDAC9-208ENST00000417496 KIAA1549Q9HCM3 1950 aa12.46□□□□□ -0.42
HDAC9-208ENST00000417496 IGKV1D-13A0A0B4J2D9 117 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 CDRT15L2A8MXV6 281 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 EIF3GO75821 320 aaKnown RBP eCLIP12.45□□□□□ -0.42
HDAC9-208ENST00000417496 IGKV1-13P0DP09 117 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 GNMTQ14749 295 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 ABLIM2Q6H8Q1 611 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 TMEM217Q8N7C4 229 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 BOD1Q96IK1 185 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 PRRG4Q9BZD6 226 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 TCFL5Q9UL49 500 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 R4GN57 208 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 hCG_1809904A0A1W2PP81 198 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 A0A1W2PPH5 198 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 A0A1W2PR64 198 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 A0A1W2PRV1 198 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 IGSF23A1L1A6 192 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 C5orf49A4QMS7 147 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 UMAD1C9J7I0 102 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 SSSCA1O60232 199 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 CST7O76096 145 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 ARF1P84077 181 aaKnown RBP12.45□□□□□ -0.42
HDAC9-208ENST00000417496 TMEM211Q6ICI0 200 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 TIPARPQ7Z3E1 657 aaKnown RBP12.45□□□□□ -0.42
HDAC9-208ENST00000417496 GAPTQ8N292 157 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 ZFP62Q8NB50 900 aaPredicted RBP12.45□□□□□ -0.42
HDAC9-208ENST00000417496 TMEM171Q8WVE6 324 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 HES7Q9BYE0 225 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 IL36GQ9NZH8 169 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 FBXO9Q9UK97 447 aaPredicted RBP12.45□□□□□ -0.42
HDAC9-208ENST00000417496 POMT1Q9Y6A1 747 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 DNAJC13O75165 2243 aa12.45□□□□□ -0.42
HDAC9-208ENST00000417496 HSD17B6O14756 317 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 DNPH1O43598 174 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 NGFP01138 241 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 PCBD1P61457 104 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 IL13RA2Q14627 380 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 HERPUD1Q15011 391 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 RBMS3Q6XE24 437 aaKnown RBP12.44□□□□□ -0.42
HDAC9-208ENST00000417496 ZNF695Q8IW36 515 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 ZNF100Q8IYN0 542 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 OR2C3Q8N628 320 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 ZNF488Q96MN9 340 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 TMEM222Q9H0R3 208 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 NOSIPQ9Y314 301 aaKnown RBP12.44□□□□□ -0.42
HDAC9-208ENST00000417496 TMED3Q9Y3Q3 217 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 ADAM20O43506 726 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 MRPL33O75394 65 aaKnown RBP12.44□□□□□ -0.42
HDAC9-208ENST00000417496 CYB561P49447 251 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 UCP3P55916 312 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 TRIM61Q5EBN2 209 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 FAM24BQ8N5W8 94 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 NEK7Q8TDX7 302 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 C1QTNF5Q9BXJ0 243 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 OR51B6Q9H340 312 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 CALHM2Q9HA72 323 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 PRDM6Q9NQX0 595 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 NCOR1O75376 2440 aa12.44□□□□□ -0.42
HDAC9-208ENST00000417496 NBEAQ8NFP9 2946 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 A0A1W2PPE2 198 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 ZNF724A8MTY0 619 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 TMEM50AO95807 157 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 PTAFRP25105 342 aa12.43□□□□□ -0.42
HDAC9-208ENST00000417496 NKX2-1P43699 371 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms