RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 GAL3ST2Q9H3Q3 398 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 GHRLQ9UBU3 117 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 ST3GAL6Q9Y274 331 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 MRPS28Q9Y2Q9 187 aaKnown RBP12.07□□□□□ -0.48
CHD1-202ENST00000414220 UBE2J1Q9Y385 318 aaPredicted RBP12.07□□□□□ -0.48
CHD1-202ENST00000414220 LINC00312Q9Y6C7 94 aa12.07□□□□□ -0.48
CHD1-202ENST00000414220 TRAV8-7A0A075B6U6 113 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 BTBD17A6NE02 478 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 CLDN34H7C241 214 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 NPFFO15130 113 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 PSPNO60542 156 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 CSN2P05814 226 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 CPEP16870 476 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 SRMP19623 302 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 MAP2K4P45985 399 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 OR3A1P47881 315 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 P2RX3P56373 397 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 UBA52P62987 128 aaKnown RBP12.06□□□□□ -0.48
CHD1-202ENST00000414220 SRSF2Q01130 221 aaKnown RBP12.06□□□□□ -0.48
CHD1-202ENST00000414220 MPV17LQ2QL34 196 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 SLC22A6Q4U2R8 563 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 MIDNQ504T8 468 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 PAN3Q58A45 887 aaKnown RBP12.06□□□□□ -0.48
CHD1-202ENST00000414220 CRIP3Q6Q6R5 217 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 GLIPR1L1Q6UWM5 242 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 TMEM86BQ8N661 226 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 ZDHHC22Q8N966 263 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 OR10K1Q8NGX5 313 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 GCDHQ92947 438 aaPredicted RBP12.06□□□□□ -0.48
CHD1-202ENST00000414220 TMEM203Q969S6 136 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 MUL1Q969V5 352 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 CST11Q9H112 138 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 DPAGT1Q9H3H5 408 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 ACOT13Q9NPJ3 140 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 OR6C3Q9NZP0 311 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 LRRC42Q9Y546 428 aa12.06□□□□□ -0.48
CHD1-202ENST00000414220 MEIOCA2RUB1 952 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 C17orf98A8MV24 154 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 RNASEK-C17orf49H0YIS7 233 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 SLC33A1O00400 549 aaPredicted RBP12.05□□□□□ -0.48
CHD1-202ENST00000414220 OR7C1O76099 320 aaPredicted RBP12.05□□□□□ -0.48
CHD1-202ENST00000414220 CRYBA1P05813 215 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 UBBP0CG47 229 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 CCL3L1P16619 93 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 ZNF273Q14593 569 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 NHLRC3Q5JS37 347 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 KRBOX4Q5JUW0 171 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 OR52W1Q6IF63 320 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 Q6P435 159 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 Q6YL49 198 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 ZNF565Q8N9K5 539 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 SSMEM1Q8WWF3 244 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 FCGR1BQ92637 280 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 TNFRSF14Q92956 283 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 ZNF48Q96MX3 618 aaPredicted RBP12.05□□□□□ -0.48
CHD1-202ENST00000414220 PPA2Q9H2U2 334 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 PRDM13Q9H4Q3 707 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 SPACA1Q9HBV2 294 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 TAS2R3Q9NYW6 316 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 POMT1Q9Y6A1 747 aa12.05□□□□□ -0.48
CHD1-202ENST00000414220 DNAJC9-AS1A6NH13 148 aa12.04□□□□□ -0.48
CHD1-202ENST00000414220 PIN1P1O15428 100 aa12.04□□□□□ -0.48
CHD1-202ENST00000414220 GABRA5P31644 462 aa12.04□□□□□ -0.48
CHD1-202ENST00000414220 PSMD7P51665 324 aa12.04□□□□□ -0.48
CHD1-202ENST00000414220 RBM11P57052 281 aaKnown RBP12.04□□□□□ -0.48
CHD1-202ENST00000414220 AESQ08117 197 aa12.04□□□□□ -0.48
CHD1-202ENST00000414220 RBM39Q14498 530 aaKnown RBP12.04□□□□□ -0.48
CHD1-202ENST00000414220 TUSC1Q2TAM9 212 aa12.04□□□□□ -0.48
CHD1-202ENST00000414220 ATAD3CQ5T2N8 411 aa12.04□□□□□ -0.48
CHD1-202ENST00000414220 PHC2Q8IXK0 858 aa12.04□□□□□ -0.48
CHD1-202ENST00000414220 NEK7Q8TDX7 302 aa12.04□□□□□ -0.48
CHD1-202ENST00000414220 A0A0U1RQK1 487 aa12.03□□□□□ -0.48
CHD1-202ENST00000414220 A0A1W2PRD5 423 aa12.03□□□□□ -0.48
CHD1-202ENST00000414220 A0A1W2PRF3 423 aa12.03□□□□□ -0.48
CHD1-202ENST00000414220 A0A1W2PRM7 423 aa12.03□□□□□ -0.48
CHD1-202ENST00000414220 ODAMA1E959 279 aa12.03□□□□□ -0.48
CHD1-202ENST00000414220 HOXA3O43365 443 aaPredicted RBP12.03□□□□□ -0.48
CHD1-202ENST00000414220 RNASE1P07998 156 aaKnown RBP12.03□□□□□ -0.48
CHD1-202ENST00000414220 UCHL1P09936 223 aa12.03□□□□□ -0.48
CHD1-202ENST00000414220 COX7A1P24310 79 aa12.03□□□□□ -0.48
CHD1-202ENST00000414220 EMX1Q04741 257 aaPredicted RBP12.03□□□□□ -0.48
CHD1-202ENST00000414220 KLRD1Q13241 179 aa12.03□□□□□ -0.48
CHD1-202ENST00000414220 SLC9A3R2Q15599 337 aa12.03□□□□□ -0.48
CHD1-202ENST00000414220 PIGYQ3MUY2 71 aa12.03□□□□□ -0.48
CHD1-202ENST00000414220 C16orf87Q6PH81 154 aa12.03□□□□□ -0.48
CHD1-202ENST00000414220 ZNF782Q6ZMW2 699 aaPredicted RBP12.03□□□□□ -0.48
CHD1-202ENST00000414220 TPRX1Q8N7U7 411 aa12.03□□□□□ -0.48
CHD1-202ENST00000414220 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.03□□□□□ -0.48
CHD1-202ENST00000414220 OR4D6Q8NGJ1 314 aa12.03□□□□□ -0.48
CHD1-202ENST00000414220 CORO2AQ92828 525 aa12.03□□□□□ -0.48
CHD1-202ENST00000414220 NCOR1P1Q9H4R4 102 aa12.03□□□□□ -0.48
CHD1-202ENST00000414220 IFT22Q9H7X7 185 aa12.03□□□□□ -0.48
CHD1-202ENST00000414220 ESM1Q9NQ30 184 aa12.03□□□□□ -0.48
CHD1-202ENST00000414220 ING3Q9NXR8 418 aa12.03□□□□□ -0.48
CHD1-202ENST00000414220 SESN1Q9Y6P5 492 aa12.03□□□□□ -0.48
CHD1-202ENST00000414220 MEIKINA0A087WXM9 373 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 MDFIC2A0A1B0GVS7 189 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 MAGEA13PA6NCF6 341 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 FAM90A10PA6NDY2 464 aa12.02□□□□□ -0.49
CHD1-202ENST00000414220 FAM90A18PA6NE21 464 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms