RNA–Protein interactions for RNA: ENST00000414120.1

LINC00887-202, long intergenic non-protein coding RNA 887, humanhuman

TSL 3 BASIC

Gene LINC00887, Length 2,880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-202ENST00000414120 OR4L1Q8NH43 312 aa12.09□□□□□ -0.47
LINC00887-202ENST00000414120 NFKBIDQ8NI38 313 aa12.09□□□□□ -0.47
LINC00887-202ENST00000414120 TMEM37Q8WXS4 190 aa12.09□□□□□ -0.47
LINC00887-202ENST00000414120 SMIM19Q96E16 107 aa12.09□□□□□ -0.47
LINC00887-202ENST00000414120 C2orf50Q96LR7 162 aa12.09□□□□□ -0.47
LINC00887-202ENST00000414120 UHRF2Q96PU4 802 aa12.09□□□□□ -0.47
LINC00887-202ENST00000414120 PRSS50Q9UI38 385 aa12.09□□□□□ -0.47
LINC00887-202ENST00000414120 BOKQ9UMX3 212 aaPredicted RBP12.09□□□□□ -0.47
LINC00887-202ENST00000414120 DAPP1Q9UN19 280 aa12.09□□□□□ -0.47
LINC00887-202ENST00000414120 ATP23Q9Y6H3 246 aa12.09□□□□□ -0.47
LINC00887-202ENST00000414120 GDF9O60383 454 aa12.09□□□□□ -0.47
LINC00887-202ENST00000414120 TRIM40Q6P9F5 258 aa12.09□□□□□ -0.47
LINC00887-202ENST00000414120 SIRT6Q8N6T7 355 aa12.09□□□□□ -0.47
LINC00887-202ENST00000414120 CYB561D1Q8N8Q1 229 aa12.09□□□□□ -0.47
LINC00887-202ENST00000414120 OR2AE1Q8NHA4 323 aa12.09□□□□□ -0.47
LINC00887-202ENST00000414120 MAL2Q969L2 176 aa12.09□□□□□ -0.47
LINC00887-202ENST00000414120 OR51I1Q9H343 314 aa12.09□□□□□ -0.47
LINC00887-202ENST00000414120 SERTAD3Q9UJW9 196 aa12.09□□□□□ -0.47
LINC00887-202ENST00000414120 HSF4Q9ULV5 492 aa12.09□□□□□ -0.47
LINC00887-202ENST00000414120 MUC3AQ02505 3323 aa12.09□□□□□ -0.47
LINC00887-202ENST00000414120 TSPAN11A1L157 253 aa12.08□□□□□ -0.47
LINC00887-202ENST00000414120 OR2T8A6NH00 312 aa12.08□□□□□ -0.47
LINC00887-202ENST00000414120 PRH1P02810 166 aa12.08□□□□□ -0.47
LINC00887-202ENST00000414120 RPL12P30050 165 aaKnown RBP12.08□□□□□ -0.47
LINC00887-202ENST00000414120 LCN6P62502 163 aa12.08□□□□□ -0.47
LINC00887-202ENST00000414120 BHLHA9Q7RTU4 235 aa12.08□□□□□ -0.47
LINC00887-202ENST00000414120 DPY19L4Q7Z388 723 aa12.08□□□□□ -0.47
LINC00887-202ENST00000414120 QTRT1Q9BXR0 403 aaKnown RBP12.08□□□□□ -0.47
LINC00887-202ENST00000414120 CCL26Q9Y258 94 aa12.08□□□□□ -0.47
LINC00887-202ENST00000414120 ATG2AQ2TAZ0 1938 aa12.08□□□□□ -0.47
LINC00887-202ENST00000414120 F8WDY8 70 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 HRASP01112 189 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 AMY2AP04746 511 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 RPS15P62841 145 aaKnown RBP12.08□□□□□ -0.48
LINC00887-202ENST00000414120 ZFP36L1Q07352 338 aaKnown RBP12.08□□□□□ -0.48
LINC00887-202ENST00000414120 PMCHL1Q16048 86 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 GABRA6Q16445 453 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 ABHD17BQ5VST6 288 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 TMEM184AQ6ZMB5 413 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 ZBTB34Q8NCN2 500 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 TSTD1Q8NFU3 115 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 UBTD2Q8WUN7 234 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 GFI1Q99684 422 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 RSPO3Q9BXY4 272 aaPredicted RBP12.08□□□□□ -0.48
LINC00887-202ENST00000414120 S1PR5Q9H228 398 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 DIRC3C9JPN6 131 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 CPSF4O95639 269 aaKnown RBP12.08□□□□□ -0.48
LINC00887-202ENST00000414120 HBE1P02100 147 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 PSG2P11465 335 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 HIST1H1AQ02539 215 aaPredicted RBP12.08□□□□□ -0.48
LINC00887-202ENST00000414120 LRP11Q86VZ4 500 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 SMIM20Q8N5G0 67 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 ZNF563Q8TA94 476 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 PARLQ9H300 379 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 SH2B3Q9UQQ2 575 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 VSIG4Q9Y279 399 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 PTPRDP23468 1912 aa12.08□□□□□ -0.48
LINC00887-202ENST00000414120 ZNF207O43670 478 aaKnown RBP12.07□□□□□ -0.48
LINC00887-202ENST00000414120 IL9P15248 144 aa12.07□□□□□ -0.48
LINC00887-202ENST00000414120 PYCR1P32322 319 aa12.07□□□□□ -0.48
LINC00887-202ENST00000414120 APOBEC1P41238 236 aaKnown RBP12.07□□□□□ -0.48
LINC00887-202ENST00000414120 YPEL3P61236 119 aaPredicted RBP12.07□□□□□ -0.48
LINC00887-202ENST00000414120 SLC25A52Q3SY17 297 aa12.07□□□□□ -0.48
LINC00887-202ENST00000414120 TMEM128Q5BJH2 165 aa12.07□□□□□ -0.48
LINC00887-202ENST00000414120 CST11Q9H112 138 aa12.07□□□□□ -0.48
LINC00887-202ENST00000414120 C13orf42A0A1B0GVH6 325 aa12.07□□□□□ -0.48
LINC00887-202ENST00000414120 TACSTD2P09758 323 aa12.07□□□□□ -0.48
LINC00887-202ENST00000414120 MMP9P14780 707 aa12.07□□□□□ -0.48
LINC00887-202ENST00000414120 PPP1CCP36873 323 aaKnown RBP12.07□□□□□ -0.48
LINC00887-202ENST00000414120 FAM78BQ5VT40 261 aa12.07□□□□□ -0.48
LINC00887-202ENST00000414120 OLIG3Q7RTU3 272 aa12.07□□□□□ -0.48
LINC00887-202ENST00000414120 POC1AQ8NBT0 407 aa12.07□□□□□ -0.48
LINC00887-202ENST00000414120 TSSK3Q96PN8 268 aa12.07□□□□□ -0.48
LINC00887-202ENST00000414120 TRIB3Q96RU7 358 aa12.07□□□□□ -0.48
LINC00887-202ENST00000414120 KXD1Q9BQD3 176 aa12.07□□□□□ -0.48
LINC00887-202ENST00000414120 HSPB9Q9BQS6 159 aa12.07□□□□□ -0.48
LINC00887-202ENST00000414120 PSMB11A5LHX3 300 aa12.06□□□□□ -0.48
LINC00887-202ENST00000414120 M0R1X1 148 aa12.06□□□□□ -0.48
LINC00887-202ENST00000414120 HLA-HP01893 362 aa12.06□□□□□ -0.48
LINC00887-202ENST00000414120 LAMP2P13473 410 aa12.06□□□□□ -0.48
LINC00887-202ENST00000414120 FCGR2CP31995 323 aa12.06□□□□□ -0.48
LINC00887-202ENST00000414120 RPL34P49207 117 aaKnown RBP12.06□□□□□ -0.48
LINC00887-202ENST00000414120 ZNF266Q14584 549 aa12.06□□□□□ -0.48
LINC00887-202ENST00000414120 CDK5R1Q15078 307 aa12.06□□□□□ -0.48
LINC00887-202ENST00000414120 ZNF880Q6PDB4 577 aa12.06□□□□□ -0.48
LINC00887-202ENST00000414120 LCNL1Q6ZST4 164 aa12.06□□□□□ -0.48
LINC00887-202ENST00000414120 OR4D11Q8NGI4 311 aa12.06□□□□□ -0.48
LINC00887-202ENST00000414120 ANAPC16Q96DE5 110 aa12.06□□□□□ -0.48
LINC00887-202ENST00000414120 P2RX4Q99571 388 aa12.06□□□□□ -0.48
LINC00887-202ENST00000414120 AGMATQ9BSE5 352 aa12.06□□□□□ -0.48
LINC00887-202ENST00000414120 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.06□□□□□ -0.48
LINC00887-202ENST00000414120 B3GALT4O96024 378 aa12.06□□□□□ -0.48
LINC00887-202ENST00000414120 CPSF6Q16630 551 aaKnown RBP eCLIP12.06□□□□□ -0.48
LINC00887-202ENST00000414120 GGTA1PQ4G0N0 100 aa12.06□□□□□ -0.48
LINC00887-202ENST00000414120 PDLIM3Q53GG5 364 aaPredicted RBP12.06□□□□□ -0.48
LINC00887-202ENST00000414120 MDGA2Q7Z553 956 aa12.06□□□□□ -0.48
LINC00887-202ENST00000414120 SYS1Q8N2H4 156 aa12.06□□□□□ -0.48
LINC00887-202ENST00000414120 FGGYQ96C11 551 aa12.06□□□□□ -0.48
LINC00887-202ENST00000414120 CXorf40BQ96DE9 158 aa12.06□□□□□ -0.48
LINC00887-202ENST00000414120 TBX5Q99593 518 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms