RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 PRSS27Q9BQR3 290 aa15.14■□□□□ 0.01
PHRF1-202ENST00000413872 LRFN3Q9BTN0 628 aa15.14■□□□□ 0.01
PHRF1-202ENST00000413872 PPP1R2P9O14990 202 aa15.14■□□□□ 0.01
PHRF1-202ENST00000413872 TMEM267Q0VDI3 215 aaPredicted RBP15.14■□□□□ 0.01
PHRF1-202ENST00000413872 TEX29Q8N6K0 151 aa15.14■□□□□ 0.01
PHRF1-202ENST00000413872 CYB5R1Q9UHQ9 305 aa15.14■□□□□ 0.01
PHRF1-202ENST00000413872 KCNMB2Q9Y691 235 aa15.14■□□□□ 0.01
PHRF1-202ENST00000413872 OR2C1O95371 312 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 LGALS7P47929 136 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 GGNBP1Q5YKI7 109 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 CCDC144NLQ6NUI1 221 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 MIA3Q5JRA6 1907 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 PPIAL4EA0A075B759 164 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 CENPVL1A0A0U1RR11 272 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 PPIAL4DF5H284 164 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 GEMIN2O14893 280 aaKnown RBP15.13■□□□□ 0.01
PHRF1-202ENST00000413872 PPIAL4FP0DN26 164 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 HNF1AP20823 631 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 GLCCI1Q86VQ1 547 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 TGIF2LYQ8IUE0 185 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 TGIF2LXQ8IUE1 241 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 ZBTB44Q8NCP5 570 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 OR1L4Q8NGR5 311 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 DPF1Q92782 380 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 PPIAL4AQ9Y536 164 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 PLXNA1Q9UIW2 1896 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 PMELP40967 661 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 GPR6P46095 362 aaPredicted RBP15.13■□□□□ 0.01
PHRF1-202ENST00000413872 MNX1P50219 401 aaPredicted RBP15.13■□□□□ 0.01
PHRF1-202ENST00000413872 OR5I1Q13606 314 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 RIPPLY2Q5TAB7 128 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 ZNF574Q6ZN55 896 aaPredicted RBP15.13■□□□□ 0.01
PHRF1-202ENST00000413872 RXFP4Q8TDU9 374 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 PTX4Q96A99 478 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 PIPOXQ9P0Z9 390 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 LNP1A1A4G5 178 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 PCOLCEQ15113 449 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 DOLPP1Q86YN1 238 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 RNF2Q99496 336 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 TMPRSS13Q9BYE2 586 aa15.13■□□□□ 0.01
PHRF1-202ENST00000413872 OR5AC1P0C628 307 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 COX6B1P14854 86 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 HLA-DRB3P79483 266 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 NFAM1Q8NET5 270 aaPredicted RBP15.12■□□□□ 0.01
PHRF1-202ENST00000413872 OR10AC1Q8NH08 325 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 DCTN6O00399 190 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 CD200P41217 278 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 LIAT1Q6ZQX7 453 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 OR10Z1Q8NGY1 313 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 ZNF519Q8TB69 540 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 OR2J1Q9GZK6 312 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 K7ESF4 209 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 SOX15O60248 233 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 PJVKQ0ZLH3 352 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 IRF3Q14653 427 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 ZNF680Q8NEM1 530 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 OR52L2PQ8NGH6 319 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 OR4A4PQ8NGN8 299 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 SAT2Q96F10 170 aaPredicted RBP15.12■□□□□ 0.01
PHRF1-202ENST00000413872 SPSB2Q99619 263 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 RASL11BQ9BPW5 248 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 A0A1W2PNV4 684 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 PAX6P26367 422 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 MVDP53602 400 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 NCR3LG1Q68D85 454 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 NKX6-2Q9C056 277 aaPredicted RBP15.12■□□□□ 0.01
PHRF1-202ENST00000413872 SLC7A10Q9NS82 523 aa15.12■□□□□ 0.01
PHRF1-202ENST00000413872 CEACAM1P13688 526 aa15.11■□□□□ 0.01
PHRF1-202ENST00000413872 EXOSC2Q13868 293 aaKnown RBP15.11■□□□□ 0.01
PHRF1-202ENST00000413872 OR2C3Q8N628 320 aa15.11■□□□□ 0.01
PHRF1-202ENST00000413872 CTHRC1Q96CG8 243 aa15.11■□□□□ 0.01
PHRF1-202ENST00000413872 R3HDM4Q96D70 268 aa15.11■□□□□ 0.01
PHRF1-202ENST00000413872 C14orf79Q96F83 325 aa15.11■□□□□ 0.01
PHRF1-202ENST00000413872 HSD17B10Q99714 261 aaKnown RBP15.11■□□□□ 0.01
PHRF1-202ENST00000413872 NTN1O95631 604 aa15.11■□□□□ 0.01
PHRF1-202ENST00000413872 BCL2L2Q92843 193 aaPredicted RBP15.11■□□□□ 0.01
PHRF1-202ENST00000413872 FAM122AQ96E09 287 aa15.11■□□□□ 0.01
PHRF1-202ENST00000413872 SOCS1O15524 211 aa15.11■□□□□ 0.01
PHRF1-202ENST00000413872 UCP2P55851 309 aa15.11■□□□□ 0.01
PHRF1-202ENST00000413872 PRSS12P56730 875 aa15.11■□□□□ 0.01
PHRF1-202ENST00000413872 TNXAQ16473 311 aa15.11■□□□□ 0.01
PHRF1-202ENST00000413872 ABHD1Q96SE0 405 aa15.11■□□□□ 0.01
PHRF1-202ENST00000413872 URGCP-MRPS24S4R325 110 aa15.11■□□□□ 0.01
PHRF1-202ENST00000413872 PCM1Q15154 2024 aa15.11■□□□□ 0.01
PHRF1-202ENST00000413872 SCN3AQ9NY46 2000 aa15.11■□□□□ 0.01
PHRF1-202ENST00000413872 ONECUT2O95948 504 aa15.11■□□□□ 0.01
PHRF1-202ENST00000413872 RHOBP62745 196 aa15.11■□□□□ 0.01
PHRF1-202ENST00000413872 PRSS54Q6PEW0 395 aa15.11■□□□□ 0.01
PHRF1-202ENST00000413872 CRHP06850 196 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 ADRB1P08588 477 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 VDAC1P21796 283 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 LIMS1P48059 325 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 PSG4Q00888 419 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 TVP23CQ96ET8 276 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 C20orf24Q9BUV8 137 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 LOC285556D6RIA3 1793 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 DBX1A6NMT0 343 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 RPL36A-HNRNPH2H7BZ11 118 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 FOXL2P58012 376 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 FFAR4Q5NUL3 377 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms