RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 TBC1D26Q86UD7 250 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 BORCS8Q96FH0 119 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 GNG13Q9P2W3 67 aa12.6□□□□□ -0.39
SEMA3F-202ENST00000413852 TRAV39A0A0B4J263 110 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 C3orf85A0A1B0GTC6 90 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 ZFP92A6NM28 416 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 SCRG1O75711 98 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 CCL3P10147 92 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 GNRHRP30968 328 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 ALDH3B1P43353 468 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 RAB5CP51148 216 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 HERV-K104P61576 105 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 KHDC3LQ587J8 217 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 TMEM252Q8N6L7 170 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 PP6455Q8WZ26 134 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 SRXN1Q9BYN0 137 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 S100A2P29034 98 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 NKX2-1P43699 371 aaPredicted RBP12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 CDX1P47902 265 aaPredicted RBP12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 DAZAP2Q15038 168 aaPredicted RBP12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 ZNF818PQ6ZRF7 136 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 FRZBQ92765 325 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 TCEAL7Q9BRU2 100 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 DEFB126Q9BYW3 111 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 UCK1Q9HA47 277 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 CRLF2Q9HC73 371 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 GAR1Q9NY12 217 aaKnown RBP12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 MTCH2Q9Y6C9 303 aa12.59□□□□□ -0.39
SEMA3F-202ENST00000413852 MPPED1O15442 326 aa12.58□□□□□ -0.39
SEMA3F-202ENST00000413852 CCNOP22674 350 aa12.58□□□□□ -0.39
SEMA3F-202ENST00000413852 ZNF92Q03936 586 aa12.58□□□□□ -0.39
SEMA3F-202ENST00000413852 ESPL1Q14674 2120 aa12.58□□□□□ -0.39
SEMA3F-202ENST00000413852 SHBQ15464 509 aa12.58□□□□□ -0.39
SEMA3F-202ENST00000413852 ZNF610Q8N9Z0 462 aa12.58□□□□□ -0.39
SEMA3F-202ENST00000413852 ABHD5Q8WTS1 349 aa12.58□□□□□ -0.39
SEMA3F-202ENST00000413852 RSG1Q9BU20 258 aa12.58□□□□□ -0.39
SEMA3F-202ENST00000413852 SUCNR1Q9BXA5 334 aa12.58□□□□□ -0.39
SEMA3F-202ENST00000413852 DECR2Q9NUI1 292 aa12.58□□□□□ -0.39
SEMA3F-202ENST00000413852 A0A0G2JRQ6 117 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 HMGB3O15347 200 aaKnown RBP12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 TLX3O43711 291 aaPredicted RBP12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 CHST1O43916 411 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 PPYP01298 95 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 RAB11AP62491 216 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 GPR157Q5UAW9 335 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 LCN15Q6UWW0 184 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 ZNF695Q8IW36 515 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 GAPTQ8N292 157 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 ZIC4Q8N9L1 334 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 NECAP1Q8NC96 275 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 GALNT14Q96FL9 552 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 PRDM13Q9H4Q3 707 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 WSB1Q9Y6I7 421 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 A0A0U1RQV5 110 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 IFNL4K9M1U5 179 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 SCAF4O95104 1147 aaKnown RBP12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 NRASP01111 189 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 CD55P08174 381 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 TRGC1P0CF51 173 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 ZNF133P52736 654 aaPredicted RBP12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 SUMO3P55854 103 aaPredicted RBP12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 RPS18P62269 152 aaKnown RBP12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 RPL23AP62750 156 aaKnown RBP12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 HIKESHIQ53FT3 197 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 OR2T2Q6IF00 324 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 SLC25A26Q70HW3 274 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 SSX7Q7RTT5 188 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 OSR2Q8N2R0 312 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 OR14L1PQ8NHC6 308 aa12.58□□□□□ -0.4
SEMA3F-202ENST00000413852 CHD3Q12873 2000 aaKnown RBP12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 A0A0J9YW62 118 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 ZFAND5O76080 213 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 IGLV3-19P01714 112 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 PGA5P0DJD9 388 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 ZNF32P17041 273 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 RBP2P50120 134 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 NXPH1P58417 271 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 DEFA6Q01524 100 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 KCNMB1Q16558 191 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 PLCXD3Q63HM9 321 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 WDR25Q64LD2 544 aaPredicted RBP12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 THNSL2Q86YJ6 484 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 SPACA9Q96E40 222 aaPredicted RBP12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 MALSU1Q96EH3 234 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 CCL28Q9NRJ3 127 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 STRAPQ9Y3F4 350 aaKnown RBP12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 DMRT1Q9Y5R6 373 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 CHCHD2Q9Y6H1 151 aaPredicted RBP12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 COL5A1P20908 1838 aaPredicted RBP12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 PMELP40967 661 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 IL13RA2Q14627 380 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 FREM1Q5H8C1 2179 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 RHBDD2Q6NTF9 364 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 YRDCQ86U90 279 aaKnown RBP12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 C14orf144Q96I85 54 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 SNX22Q96L94 193 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 DSPP15924 2871 aaKnown RBP12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 KIAA2026Q5HYC2 2103 aa12.57□□□□□ -0.4
SEMA3F-202ENST00000413852 ZNF729A6NN14 1252 aaPredicted RBP12.56□□□□□ -0.4
SEMA3F-202ENST00000413852 WRBO00258 174 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms