RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 HTR3BO95264 441 aa12.04□□□□□ -0.48
LIMS4-201ENST00000413601 ZNF93P35789 620 aaPredicted RBP12.04□□□□□ -0.48
LIMS4-201ENST00000413601 GLIPR1P48060 266 aa12.04□□□□□ -0.48
LIMS4-201ENST00000413601 RAG2P55895 527 aa12.04□□□□□ -0.48
LIMS4-201ENST00000413601 LGALS4P56470 323 aa12.04□□□□□ -0.48
LIMS4-201ENST00000413601 RIPK1Q13546 671 aa12.04□□□□□ -0.48
LIMS4-201ENST00000413601 ASCL4Q6XD76 172 aa12.04□□□□□ -0.48
LIMS4-201ENST00000413601 LHFPL4Q7Z7J7 247 aa12.04□□□□□ -0.48
LIMS4-201ENST00000413601 CHST4Q8NCG5 386 aa12.04□□□□□ -0.48
LIMS4-201ENST00000413601 MYDGFQ969H8 173 aa12.04□□□□□ -0.48
LIMS4-201ENST00000413601 ZNF184Q99676 751 aaPredicted RBP12.04□□□□□ -0.48
LIMS4-201ENST00000413601 SSX3Q99909 188 aa12.04□□□□□ -0.48
LIMS4-201ENST00000413601 ZNF747Q9BV97 191 aa12.04□□□□□ -0.48
LIMS4-201ENST00000413601 PAK1IP1Q9NWT1 392 aaPredicted RBP12.04□□□□□ -0.48
LIMS4-201ENST00000413601 SCN3BQ9NY72 215 aa12.04□□□□□ -0.48
LIMS4-201ENST00000413601 CKLFQ9UBR5 152 aa12.04□□□□□ -0.48
LIMS4-201ENST00000413601 VPREB3Q9UKI3 123 aa12.04□□□□□ -0.48
LIMS4-201ENST00000413601 ING4Q9UNL4 249 aa12.04□□□□□ -0.48
LIMS4-201ENST00000413601 TRBV5-7A0A0A0MS05 114 aa12.03□□□□□ -0.48
LIMS4-201ENST00000413601 H3BUX3 64 aa12.03□□□□□ -0.48
LIMS4-201ENST00000413601 HSPB6O14558 160 aa12.03□□□□□ -0.48
LIMS4-201ENST00000413601 GPX5O75715 221 aa12.03□□□□□ -0.48
LIMS4-201ENST00000413601 MMP23AO75900 390 aa12.03□□□□□ -0.48
LIMS4-201ENST00000413601 ARG1P05089 322 aa12.03□□□□□ -0.48
LIMS4-201ENST00000413601 MYF6P23409 242 aa12.03□□□□□ -0.48
LIMS4-201ENST00000413601 TGFBR2P37173 567 aa12.03□□□□□ -0.48
LIMS4-201ENST00000413601 RPL15P61313 204 aaKnown RBP12.03□□□□□ -0.48
LIMS4-201ENST00000413601 ATXN7L3Q14CW9 347 aaPredicted RBP12.03□□□□□ -0.48
LIMS4-201ENST00000413601 PIGYQ3MUY2 71 aa12.03□□□□□ -0.48
LIMS4-201ENST00000413601 RNLSQ5VYX0 342 aa12.03□□□□□ -0.48
LIMS4-201ENST00000413601 GDPGP1Q6ZNW5 385 aa12.03□□□□□ -0.48
LIMS4-201ENST00000413601 OR51T1Q8NGJ9 327 aa12.03□□□□□ -0.48
LIMS4-201ENST00000413601 OR13D1Q8NGV5 346 aa12.03□□□□□ -0.48
LIMS4-201ENST00000413601 OR4F5Q8NH21 305 aa12.03□□□□□ -0.48
LIMS4-201ENST00000413601 COQ2Q96H96 371 aa12.03□□□□□ -0.48
LIMS4-201ENST00000413601 MND1Q9BWT6 205 aa12.03□□□□□ -0.48
LIMS4-201ENST00000413601 CDCA4Q9BXL8 241 aa12.03□□□□□ -0.48
LIMS4-201ENST00000413601 MEGF9Q9H1U4 602 aa12.03□□□□□ -0.48
LIMS4-201ENST00000413601 VCX3BQ9H321 246 aa12.03□□□□□ -0.48
LIMS4-201ENST00000413601 UBE2J1Q9Y385 318 aaPredicted RBP12.03□□□□□ -0.48
LIMS4-201ENST00000413601 TRGV10A0A0A0MS01 117 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 TRAV24A0A0B4J272 114 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 FUOMA2VDF0 154 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 POM121CA8CG34 1229 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 ODF3BA8MYP8 253 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 CLPXO76031 633 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 NDUFA7O95182 113 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 CSN2P05814 226 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 CD1AP06126 327 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 FSTP19883 344 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 SLC35A2P78381 396 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 DYNC1I2Q13409 638 aaKnown RBP12.02□□□□□ -0.49
LIMS4-201ENST00000413601 KRBOX4Q5JUW0 171 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 IZUMO2Q6UXV1 221 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 DYNAPQ8N1N2 210 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 Q8NFD4 153 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 OR11H6Q8NGC7 330 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 OR5R1Q8NH85 324 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 DERL3Q96Q80 235 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 OR5M11Q96RB7 305 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 S100A13Q99584 98 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 ANKRD60Q9BZ19 345 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 METTL9Q9H1A3 318 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 PPIL3Q9H2H8 161 aaKnown RBP12.02□□□□□ -0.49
LIMS4-201ENST00000413601 BEX1Q9HBH7 125 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 LSM2Q9Y333 95 aaKnown RBP12.02□□□□□ -0.49
LIMS4-201ENST00000413601 MMP24Q9Y5R2 645 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 SESN1Q9Y6P5 492 aa12.02□□□□□ -0.49
LIMS4-201ENST00000413601 ODAMA1E959 279 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 FAM90A8PA6NJQ4 464 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 PIN1P1O15428 100 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 CSTBP04080 98 aaKnown RBP12.01□□□□□ -0.49
LIMS4-201ENST00000413601 MAS1P04201 325 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 SERPINA2P20848 420 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 BDH1Q02338 343 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 IL13RA2Q14627 380 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 SPHARQ15513 63 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 MED22Q15528 200 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 LY6EQ16553 131 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 LRRC75BQ2VPJ9 315 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 PAN3Q58A45 887 aaKnown RBP12.01□□□□□ -0.49
LIMS4-201ENST00000413601 LDLRAD2Q5SZI1 272 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 PRAMEF5Q5TYX0 476 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 ZNF626Q68DY1 528 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 SHISA2Q6UWI4 295 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 BAIAP2L2Q6UXY1 529 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 OSR2Q8N2R0 312 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 CORO2AQ92828 525 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 TMEM133Q9H2Q1 129 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 IL36GQ9NZH8 169 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 ZNF581Q9P0T4 197 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 FOXJ3Q9UPW0 622 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 ST3GAL6Q9Y274 331 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 TPRKBQ9Y3C4 175 aa12.01□□□□□ -0.49
LIMS4-201ENST00000413601 IGHV2-26A0A0B4J1V2 119 aa12□□□□□ -0.49
LIMS4-201ENST00000413601 A0A1B0GUS0 222 aa12□□□□□ -0.49
LIMS4-201ENST00000413601 A0A1W2PP11 408 aa12□□□□□ -0.49
LIMS4-201ENST00000413601 CDK2P24941 298 aa12□□□□□ -0.49
LIMS4-201ENST00000413601 RBM11P57052 281 aaKnown RBP12□□□□□ -0.49
LIMS4-201ENST00000413601 INSL4Q14641 139 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms