RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 BEST4Q8NFU0 473 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 TRMT61AQ96FX7 289 aaKnown RBP7.44□□□□□ -1.22
SYNE1-211ENST00000413186 SPACA5Q96QH8 159 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 NICN1Q9BSH3 213 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 EHFQ9NZC4 300 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 TAAR3PQ9P1P4 343 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 ARPC5O15511 151 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 OR2J3O76001 311 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 SNAPINO95295 136 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 ALDOBP05062 364 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 NAT1P18440 290 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 TNFAIP6P98066 277 aaPredicted RBP7.44□□□□□ -1.22
SYNE1-211ENST00000413186 PNLIPRP3Q17RR3 467 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 C1QTNF12Q5T7M4 302 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 TFAP2EQ6VUC0 442 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 LILRB2Q8N423 598 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 OR4S2Q8NH73 311 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 METTL17Q9H7H0 456 aaPredicted RBP7.44□□□□□ -1.22
SYNE1-211ENST00000413186 FRRS1LQ9P0K9 344 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 MUC3AQ02505 3323 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 E9PLN8 166 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 MGMTP16455 207 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 NFYAP23511 347 aaPredicted RBP7.44□□□□□ -1.22
SYNE1-211ENST00000413186 SRSF6Q13247 344 aaKnown RBP7.44□□□□□ -1.22
SYNE1-211ENST00000413186 TIMM23BQ5SRD1 257 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 LILRB4Q8NHJ6 448 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 MRPS24Q96EL2 167 aaKnown RBP7.44□□□□□ -1.22
SYNE1-211ENST00000413186 VKORC1Q9BQB6 163 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 FABP7O15540 132 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 GSTZ1O43708 216 aaPredicted RBP7.44□□□□□ -1.22
SYNE1-211ENST00000413186 TPT1P13693 172 aaKnown RBP7.44□□□□□ -1.22
SYNE1-211ENST00000413186 NDUFB7P17568 137 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 RAB5AP20339 215 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 GPM6AP51674 278 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 FXYD4P59646 89 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 SFRP5Q5T4F7 317 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 SLC36A1Q7Z2H8 476 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 LRRC75AQ8NAA5 344 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 H1FXQ92522 213 aaKnown RBP7.44□□□□□ -1.22
SYNE1-211ENST00000413186 ZNF714Q96N38 554 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 OR4C12Q96R67 309 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 NEURL2Q9BR09 285 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 HRASLSQ9HDD0 168 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 AK3Q9UIJ7 227 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 ST3GAL6Q9Y274 331 aa7.44□□□□□ -1.22
SYNE1-211ENST00000413186 INHBBP09529 407 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 IL3RAP26951 378 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 CHATP28329 748 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 OR10A3P58181 314 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 DGCR2P98153 550 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 HFEQ30201 348 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 Q3ZCU0 254 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 FAM27D1Q5T7N8 215 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 OR52W1Q6IF63 320 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 CD200R1LQ6Q8B3 271 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 GABRG1Q8N1C3 465 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 TNFRSF14Q92956 283 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 C1orf123Q9NWV4 160 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 WNK1Q9H4A3 2382 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 TEX50A0A1B0GTY4 177 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 SS18L1O75177 396 aaPredicted RBP7.43□□□□□ -1.22
SYNE1-211ENST00000413186 IGHG3P01860 377 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 GFRA1P56159 465 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 MFGE8Q08431 387 aaPredicted RBP7.43□□□□□ -1.22
SYNE1-211ENST00000413186 FOXO1Q12778 655 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 IL24Q13007 206 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 KIF26BQ2KJY2 2108 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 LINC01590Q5TEZ4 76 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 BTLAQ7Z6A9 289 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 TMEM229BQ8NBD8 167 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 MED30Q96HR3 178 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 RBM14Q96PK6 669 aaKnown RBP7.43□□□□□ -1.22
SYNE1-211ENST00000413186 DIRC2Q96SL1 478 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 FAM103A1Q9BTL3 118 aaKnown RBP7.43□□□□□ -1.22
SYNE1-211ENST00000413186 TECRQ9NZ01 308 aaKnown RBP7.43□□□□□ -1.22
SYNE1-211ENST00000413186 ZNF629Q9UEG4 869 aaPredicted RBP7.43□□□□□ -1.22
SYNE1-211ENST00000413186 PURGQ9UJV8 347 aaKnown RBP7.43□□□□□ -1.22
SYNE1-211ENST00000413186 COL6A6A6NMZ7 2263 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 NBASA2RRP1 2371 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 IGKV3D-15A0A087WSY6 115 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 RAMP1O60894 148 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 SERPINE2P07093 398 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 M6PRP20645 277 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 PTGFRP43088 359 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 CATR1Q13166 79 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 KCNMB1Q16558 191 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 MICBQ29980 383 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 ZBTB37Q5TC79 503 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 CFAP77Q6ZQR2 320 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 DEFB108BQ8NET1 73 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 SLC25A40Q8TBP6 338 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 SLAMF9Q96A28 289 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 PRDM14Q9GZV8 571 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 MYOZ1Q9NP98 299 aaPredicted RBP7.43□□□□□ -1.22
SYNE1-211ENST00000413186 ZNF107Q9UII5 783 aaPredicted RBP7.43□□□□□ -1.22
SYNE1-211ENST00000413186 MEIS3P1A6NDR6 274 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 MOGAT2Q3SYC2 334 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 ZNF546Q86UE3 836 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 MARVELD1Q9BSK0 173 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 CNTNAP3Q9BZ76 1288 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms