RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 AQP7O14520 342 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 CXCL1P09341 107 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 GABRA4P48169 554 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 NUTF2P61970 127 aaKnown RBP12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 MESP2Q0VG99 397 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 RAB31Q13636 194 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 PDCD1Q15116 288 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 ABLIM2Q6H8Q1 611 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 SMIM15Q7Z3B0 74 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 TBC1D26Q86UD7 250 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 DEFB119Q8N690 84 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 EDARADDQ8WWZ3 215 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 P4HTMQ9NXG6 502 aa12.2□□□□□ -0.46
CLTCL1-201ENST00000412649 SDK1Q7Z5N4 2213 aa12.19□□□□□ -0.46
CLTCL1-201ENST00000412649 DTYMKP23919 212 aa12.19□□□□□ -0.46
CLTCL1-201ENST00000412649 PCBD1P61457 104 aa12.19□□□□□ -0.46
CLTCL1-201ENST00000412649 FAM166AQ6J272 317 aa12.19□□□□□ -0.46
CLTCL1-201ENST00000412649 ZNF519Q8TB69 540 aa12.19□□□□□ -0.46
CLTCL1-201ENST00000412649 MRPL38Q96DV4 380 aaKnown RBP12.19□□□□□ -0.46
CLTCL1-201ENST00000412649 CLEC18AA5D8T8 446 aa12.19□□□□□ -0.46
CLTCL1-201ENST00000412649 TM4SF4P48230 202 aa12.19□□□□□ -0.46
CLTCL1-201ENST00000412649 CLEC18CQ8NCF0 446 aa12.19□□□□□ -0.46
CLTCL1-201ENST00000412649 EXTL1Q92935 676 aa12.19□□□□□ -0.46
CLTCL1-201ENST00000412649 PCGF1Q9BSM1 259 aa12.19□□□□□ -0.46
CLTCL1-201ENST00000412649 IGHV3-20A0A0C4DH32 117 aa12.19□□□□□ -0.46
CLTCL1-201ENST00000412649 MASP2O00187 686 aa12.19□□□□□ -0.46
CLTCL1-201ENST00000412649 HNF1AP20823 631 aa12.19□□□□□ -0.46
CLTCL1-201ENST00000412649 SLC25A22Q9H936 323 aa12.19□□□□□ -0.46
CLTCL1-201ENST00000412649 TMEM74BQ9NUR3 256 aa12.19□□□□□ -0.46
CLTCL1-201ENST00000412649 FAM206AQ9NX38 181 aa12.19□□□□□ -0.46
CLTCL1-201ENST00000412649 HRASP01112 189 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 PPYP01298 95 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 NTF3P20783 257 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 TNFRSF4P43489 277 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 HNRNPKP61978 463 aaKnown RBP eCLIP12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 ZNF439Q8NDP4 499 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 OR11L1Q8NGX0 322 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 NEIL1Q96FI4 390 aaPredicted RBP12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 PPP1R14DQ9NXH3 145 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 LBX1P52954 281 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 RPP30P78346 268 aaKnown RBP12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 MYBPHQ13203 477 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 TIPARPQ7Z3E1 657 aaKnown RBP12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 PTPMT1Q8WUK0 201 aaPredicted RBP12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 TRAV34A0A0B4J273 112 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 GJE1A6NN92 205 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 PDCD6O75340 191 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 ZFAND5O76080 213 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 ERVFC1-1P60608 527 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 HERPUD1Q15011 391 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 SLC25A26Q70HW3 274 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 C11orf42Q8N5U0 333 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 OR10P1Q8NGE3 313 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 MRGPRX4Q96LA9 322 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 SHISA8B8ZZ34 492 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 UBE2G2P60604 165 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 PHYHD1Q5SRE7 291 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 MAML2Q8IZL2 1156 aaPredicted RBP12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 ADGRG7Q96K78 797 aa12.18□□□□□ -0.46
CLTCL1-201ENST00000412649 LOC101059948A0A1B0GTJ6 334 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 SUMO3P55854 103 aaPredicted RBP12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 CARD18P57730 90 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 DNLZQ5SXM8 178 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 LHX8Q68G74 356 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 BOD1Q96IK1 185 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 TOX2Q96NM4 488 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 TRAPPC2LQ9UL33 140 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 DHRS7CA6NNS2 312 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 MDH2P40926 338 aaKnown RBP12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 CATR1Q13166 79 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 TMEM187Q14656 261 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 SMOC1Q9H4F8 434 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 KIF26BQ2KJY2 2108 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 PAPPA2Q9BXP8 1791 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 A0A1W2PQD3 144 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 HOXC4P09017 264 aaPredicted RBP12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 CRISP2P16562 243 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 TMEM50BP56557 158 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 PRAMEF20Q5VT98 475 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 Q6ZN92 141 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 PAQR4Q8N4S7 273 aaPredicted RBP12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 MRPL30Q8TCC3 161 aaKnown RBP12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 IL23AQ9NPF7 189 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 PPP1R3CQ9UQK1 317 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 ALPK3Q96L96 1907 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 LDLRAD4O15165 306 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 SYNGR4O95473 234 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 SLC38A11Q08AI6 406 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 DEFB133Q30KQ1 61 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 VN1R17PQ8TDU5 208 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 P2RX4Q99571 388 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 ANGPTL4Q9BY76 406 aa12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 OPN3Q9H1Y3 402 aaPredicted RBP12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 CISD1Q9NZ45 108 aaKnown RBP12.17□□□□□ -0.46
CLTCL1-201ENST00000412649 LOC102723971A0A1B0GUV8 181 aa12.16□□□□□ -0.46
CLTCL1-201ENST00000412649 LYL1P12980 280 aa12.16□□□□□ -0.46
CLTCL1-201ENST00000412649 CD82P27701 267 aa12.16□□□□□ -0.46
CLTCL1-201ENST00000412649 SUPT4H1P63272 117 aaKnown RBP12.16□□□□□ -0.46
CLTCL1-201ENST00000412649 COL10A1Q03692 680 aa12.16□□□□□ -0.46
CLTCL1-201ENST00000412649 TSTD1Q8NFU3 115 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms