RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 SVIPQ8NHG7 77 aa7.55□□□□□ -1.2
PBRM1-209ENST00000412587 ZCCHC14Q8WYQ9 949 aaKnown RBP7.55□□□□□ -1.2
PBRM1-209ENST00000412587 HSD17B8Q92506 261 aa7.55□□□□□ -1.2
PBRM1-209ENST00000412587 SPACA9Q96E40 222 aaPredicted RBP7.55□□□□□ -1.2
PBRM1-209ENST00000412587 WDR34Q96EX3 536 aa7.55□□□□□ -1.2
PBRM1-209ENST00000412587 SMIM8Q96KF7 97 aa7.55□□□□□ -1.2
PBRM1-209ENST00000412587 SNHG12Q9BXW3 62 aa7.55□□□□□ -1.2
PBRM1-209ENST00000412587 PEF1Q9UBV8 284 aaKnown RBP7.55□□□□□ -1.2
PBRM1-209ENST00000412587 TRIP11Q15643 1979 aa7.55□□□□□ -1.2
PBRM1-209ENST00000412587 NUP214P35658 2090 aaPredicted RBP7.55□□□□□ -1.2
PBRM1-209ENST00000412587 MED19A0JLT2 244 aaPredicted RBP7.55□□□□□ -1.2
PBRM1-209ENST00000412587 FCN1O00602 326 aa7.55□□□□□ -1.2
PBRM1-209ENST00000412587 RPS18P62269 152 aaKnown RBP7.55□□□□□ -1.2
PBRM1-209ENST00000412587 ZNF343Q6P1L6 599 aa7.55□□□□□ -1.2
PBRM1-209ENST00000412587 FA2HQ7L5A8 372 aa7.55□□□□□ -1.2
PBRM1-209ENST00000412587 C17orf78Q8N4C9 275 aa7.55□□□□□ -1.2
PBRM1-209ENST00000412587 OR5D18Q8NGL1 313 aa7.55□□□□□ -1.2
PBRM1-209ENST00000412587 OR11L1Q8NGX0 322 aa7.55□□□□□ -1.2
PBRM1-209ENST00000412587 LANCL2Q9NS86 450 aa7.55□□□□□ -1.2
PBRM1-209ENST00000412587 HSPB2A8KAH6 182 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 KIAA1324LA8MWY0 1029 aaPredicted RBP7.54□□□□□ -1.2
PBRM1-209ENST00000412587 IGHV2-5P01817 119 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 ELLP55199 621 aaPredicted RBP7.54□□□□□ -1.2
PBRM1-209ENST00000412587 GRB2P62993 217 aaKnown RBP7.54□□□□□ -1.2
PBRM1-209ENST00000412587 SRSF3P84103 164 aaKnown RBP7.54□□□□□ -1.2
PBRM1-209ENST00000412587 RPL18Q07020 188 aaKnown RBP7.54□□□□□ -1.2
PBRM1-209ENST00000412587 IL13RA2Q14627 380 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 HSPB2Q16082 182 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 DEFB124Q8NES8 71 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 OR2Y1Q8NGV0 311 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 PINX1Q96BK5 328 aaKnown RBP7.54□□□□□ -1.2
PBRM1-209ENST00000412587 ZNF385AQ96PM9 386 aaKnown RBP7.54□□□□□ -1.2
PBRM1-209ENST00000412587 AQP10Q96PS8 301 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 VN1R1Q9GZP7 353 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 CDC42EP3Q9UKI2 254 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 KCNE1BA0A087WTH5 132 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 KCNAB3O43448 404 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 HIST1H1CP16403 213 aaKnown RBP7.54□□□□□ -1.2
PBRM1-209ENST00000412587 TFPI2P48307 235 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 ARF6P62330 175 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 EMC4Q5J8M3 183 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 PRSS41Q7RTY9 318 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 OR10W1Q8NGF6 305 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 PELI1Q96FA3 418 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 HAO2Q9NYQ3 351 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 YTHDF2Q9Y5A9 579 aaKnown RBP7.54□□□□□ -1.2
PBRM1-209ENST00000412587 ATAD5Q96QE3 1844 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 IL2RAP01589 272 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 ZFP36L2P47974 494 aaKnown RBP7.54□□□□□ -1.2
PBRM1-209ENST00000412587 HLA-DRB5Q30154 266 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 KIRREL2Q6UWL6 708 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 VN1R4Q7Z5H5 301 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 LIPHQ8WWY8 451 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 SLC25A28Q96A46 364 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 GCM1Q9NP62 436 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 ZNF346Q9UL40 294 aaKnown RBP7.54□□□□□ -1.2
PBRM1-209ENST00000412587 RCL1Q9Y2P8 373 aaKnown RBP7.54□□□□□ -1.2
PBRM1-209ENST00000412587 MRPS28Q9Y2Q9 187 aaKnown RBP7.54□□□□□ -1.2
PBRM1-209ENST00000412587 H0YL77 283 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 CBR3O75828 277 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 P2RY1P47900 373 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 EMDP50402 254 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 ERVK-16P61578 105 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 SNAI3Q3KNW1 292 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 Q8WTZ3 238 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 PTPMT1Q8WUK0 201 aaPredicted RBP7.54□□□□□ -1.2
PBRM1-209ENST00000412587 FGGYQ96C11 551 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 MFRPQ9BY79 579 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 CLCF1Q9UBD9 225 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 NAT8BQ9UHF3 227 aa7.54□□□□□ -1.2
PBRM1-209ENST00000412587 LOC102723971A0A1B0GUV8 181 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 A0A1W2PQF6 199 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 KLK10O43240 276 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 SCGB2A1O75556 95 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 SUMO3P55854 103 aaPredicted RBP7.53□□□□□ -1.2
PBRM1-209ENST00000412587 PPP1CAP62136 330 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 RAE1P78406 368 aaKnown RBP7.53□□□□□ -1.2
PBRM1-209ENST00000412587 BAXQ07812 192 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 EIF4EBP2Q13542 120 aaPredicted RBP7.53□□□□□ -1.2
PBRM1-209ENST00000412587 PLPPR5Q32ZL2 321 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 SMIM21Q3B7S5 101 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 COX19Q49B96 90 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 SLC25A26Q70HW3 274 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 TSSK2Q96PF2 358 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 SIGMAR1Q99720 223 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 NKX2-2O95096 273 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 RPS4Y1P22090 263 aaKnown RBP7.53□□□□□ -1.2
PBRM1-209ENST00000412587 WDR5BQ86VZ2 330 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 DMBX1Q8NFW5 382 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 OR1L6Q8NGR2 347 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 KCNE4Q8WWG9 221 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 ZNF48Q96MX3 618 aaPredicted RBP7.53□□□□□ -1.2
PBRM1-209ENST00000412587 TMEM191AQ9H0A3 160 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 FAM60AQ9NP50 221 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 CLEC1BQ9P126 229 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 KCNE3Q9Y6H6 103 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 TMEM238C9JI98 176 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 OGG1O15527 345 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 PDE6DO43924 150 aa7.53□□□□□ -1.2
PBRM1-209ENST00000412587 CDS2O95674 445 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms