RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 SULT1C4O75897 302 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 APOL3O95236 402 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 SNRNP70P08621 437 aaKnown RBP11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 NHLRC4P0CG21 123 aaPredicted RBP11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 ATF1P18846 271 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 PRKACBP22694 351 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 NFYBP25208 207 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 LMO1P25800 156 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 FLOT2Q14254 428 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 KRBOX4Q5JUW0 171 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 C12orf73Q69YU5 71 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 LHFPL2Q6ZUX7 228 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 THNSL2Q86YJ6 484 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 KLHL30-AS1Q8NEE0 82 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 OR10H4Q8NGA5 316 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 TFAP2CQ92754 450 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 TOMM40LQ969M1 308 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 RFT1Q96AA3 541 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 RPEQ96AT9 228 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 P2RX4Q99571 388 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 KRT84Q9NSB2 600 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 WARS2Q9UGM6 360 aaKnown RBP11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 LINC00527Q9UJ94 153 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 U3KQK5 164 aa11.27□□□□□ -0.61
HLA-DQB2-229ENST00000411527 A0A087X0M5 115 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 IGKV1-12A0A0C4DH73 117 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 A0A1B0GX30 115 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 FAM90A18PA6NE21 464 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 FAM90A16PA6NEW6 464 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 FAM90A20PA6NIJ5 464 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 ZNF729A6NN14 1252 aaPredicted RBP11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 FAM90A9PA6NNJ1 464 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 ZAR1LA6NP61 321 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 SERPINE3A8MV23 424 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 FAM90A12PA8MX19 464 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 FAM90A5PA8MXJ8 464 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 IGKV1D-12P01611 117 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 FAM90A15PP0C7V4 464 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 FAM90A13PP0C7W8 464 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 FAM90A14PP0C7W9 464 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 FAM90A24PP0C7X0 464 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 OCM2P0CE71 109 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 OCMP0CE72 109 aaPredicted RBP11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 UBCP0CG48 685 aaKnown RBP11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 ZNF44P15621 663 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 SLC6A1P30531 599 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 KIR3DL2P43630 455 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 HES1Q14469 280 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 HNF4GQ14541 408 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 C17orf58Q2M2W7 97 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 OR56B4Q8NH76 319 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 OR9G1Q8NH87 305 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 FGGYQ96C11 551 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 COQ2Q96H96 371 aa11.26□□□□□ -0.61
HLA-DQB2-229ENST00000411527 TCRBV3S1A0A5B6 114 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 H0YHG0 523 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 KDM4BO94953 1096 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 ZNF20P17024 532 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 TMEM11P17152 192 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 ATP6V1E1P36543 226 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 RAB25P57735 213 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 SLC35B1P78383 322 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 ATXN7L3Q14CW9 347 aaPredicted RBP11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 TP53I3Q53FA7 332 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 TMEM244Q5VVB8 128 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 UTS2BQ765I0 119 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 ZNF695Q8IW36 515 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 DRAM1Q8N682 238 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 C5orf56Q8N8D9 126 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 KIRREL1Q96J84 757 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 OPALINQ96PE5 141 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 DUX3Q96PT4 197 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 SPACA5Q96QH8 159 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 COMMD4Q9H0A8 199 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 PPIL3Q9H2H8 161 aaKnown RBP11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 PCDHB16Q9NRJ7 776 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 GNG8Q9UK08 70 aa11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 AMMECR1Q9Y4X0 333 aaPredicted RBP11.25□□□□□ -0.61
HLA-DQB2-229ENST00000411527 KBTBD11-OT1A0A1B0GTJ5 212 aa11.24□□□□□ -0.61
HLA-DQB2-229ENST00000411527 J3QR06 171 aa11.24□□□□□ -0.61
HLA-DQB2-229ENST00000411527 SLC33A1O00400 549 aaPredicted RBP11.24□□□□□ -0.61
HLA-DQB2-229ENST00000411527 DEGS1O15121 323 aa11.24□□□□□ -0.61
HLA-DQB2-229ENST00000411527 RAMP3O60896 148 aa11.24□□□□□ -0.61
HLA-DQB2-229ENST00000411527 IGHV3-7P01780 117 aa11.24□□□□□ -0.61
HLA-DQB2-229ENST00000411527 CSN2P05814 226 aa11.24□□□□□ -0.61
HLA-DQB2-229ENST00000411527 HTR1FP30939 366 aa11.24□□□□□ -0.61
HLA-DQB2-229ENST00000411527 BNIP1Q12981 228 aa11.24□□□□□ -0.61
HLA-DQB2-229ENST00000411527 Q6P435 159 aa11.24□□□□□ -0.61
HLA-DQB2-229ENST00000411527 FAM220AQ7Z4H9 259 aa11.24□□□□□ -0.61
HLA-DQB2-229ENST00000411527 SLC35E3Q7Z769 313 aa11.24□□□□□ -0.61
HLA-DQB2-229ENST00000411527 COMMD1Q8N668 190 aa11.24□□□□□ -0.61
HLA-DQB2-229ENST00000411527 OR5D18Q8NGL1 313 aa11.24□□□□□ -0.61
HLA-DQB2-229ENST00000411527 UTP4Q969X6 686 aaKnown RBP11.24□□□□□ -0.61
HLA-DQB2-229ENST00000411527 SPSB1Q96BD6 273 aa11.24□□□□□ -0.61
HLA-DQB2-229ENST00000411527 HRASLS5Q96KN8 279 aa11.24□□□□□ -0.61
HLA-DQB2-229ENST00000411527 NEK6Q9HC98 313 aa11.24□□□□□ -0.61
HLA-DQB2-229ENST00000411527 OR6C3Q9NZP0 311 aa11.24□□□□□ -0.61
HLA-DQB2-229ENST00000411527 G3V2T6 193 aa11.23□□□□□ -0.61
HLA-DQB2-229ENST00000411527 CCL24O00175 119 aa11.23□□□□□ -0.61
HLA-DQB2-229ENST00000411527 FGF16O43320 207 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 328.2 ms