RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 LRP5LA4QPB2 252 aa11.63□□□□□ -0.55
LIMS1-205ENST00000410093 TMEM210A6NLX4 147 aa11.63□□□□□ -0.55
LIMS1-205ENST00000410093 EEF1E1-BLOC1S5C9J1V9 151 aa11.63□□□□□ -0.55
LIMS1-205ENST00000410093 CCSO14618 274 aa11.63□□□□□ -0.55
LIMS1-205ENST00000410093 TAAR5O14804 337 aa11.63□□□□□ -0.55
LIMS1-205ENST00000410093 NAPSAO96009 420 aa11.63□□□□□ -0.55
LIMS1-205ENST00000410093 NGFP01138 241 aa11.63□□□□□ -0.55
LIMS1-205ENST00000410093 WT1P19544 449 aaPredicted RBP11.63□□□□□ -0.55
LIMS1-205ENST00000410093 BCL3P20749 454 aa11.63□□□□□ -0.55
LIMS1-205ENST00000410093 IGHV1-2P23083 117 aa11.63□□□□□ -0.55
LIMS1-205ENST00000410093 MDH2P40926 338 aaKnown RBP11.63□□□□□ -0.55
LIMS1-205ENST00000410093 ZNF169Q14929 603 aaPredicted RBP11.63□□□□□ -0.55
LIMS1-205ENST00000410093 SLC9A3R2Q15599 337 aa11.63□□□□□ -0.55
LIMS1-205ENST00000410093 FAM76BQ5HYJ3 339 aa11.63□□□□□ -0.55
LIMS1-205ENST00000410093 SLC22A25Q6T423 547 aa11.63□□□□□ -0.55
LIMS1-205ENST00000410093 PCSK4Q6UW60 755 aa11.63□□□□□ -0.55
LIMS1-205ENST00000410093 STOML3Q8TAV4 291 aa11.63□□□□□ -0.55
LIMS1-205ENST00000410093 RSRP1Q9BUV0 290 aa11.63□□□□□ -0.55
LIMS1-205ENST00000410093 DNTTIP1Q9H147 329 aa11.63□□□□□ -0.55
LIMS1-205ENST00000410093 NAA60Q9H7X0 242 aa11.63□□□□□ -0.55
LIMS1-205ENST00000410093 PLSCR4Q9NRQ2 329 aa11.63□□□□□ -0.55
LIMS1-205ENST00000410093 RNF222A6NCQ9 220 aa11.62□□□□□ -0.55
LIMS1-205ENST00000410093 RLN2P04090 185 aa11.62□□□□□ -0.55
LIMS1-205ENST00000410093 TK1P04183 234 aa11.62□□□□□ -0.55
LIMS1-205ENST00000410093 CCL2P13500 99 aa11.62□□□□□ -0.55
LIMS1-205ENST00000410093 NPBWR2P48146 333 aa11.62□□□□□ -0.55
LIMS1-205ENST00000410093 P2RY6Q15077 328 aa11.62□□□□□ -0.55
LIMS1-205ENST00000410093 DEFB109BQ30KR1 87 aa11.62□□□□□ -0.55
LIMS1-205ENST00000410093 ANKRD55Q3KP44 614 aa11.62□□□□□ -0.55
LIMS1-205ENST00000410093 SHEQ5VZ18 495 aa11.62□□□□□ -0.55
LIMS1-205ENST00000410093 EIF4E3Q8N5X7 224 aaKnown RBP11.62□□□□□ -0.55
LIMS1-205ENST00000410093 MAFIPQ8WZ33 124 aa11.62□□□□□ -0.55
LIMS1-205ENST00000410093 SLAMF9Q96A28 289 aa11.62□□□□□ -0.55
LIMS1-205ENST00000410093 HDHD3Q9BSH5 251 aaPredicted RBP11.62□□□□□ -0.55
LIMS1-205ENST00000410093 OR51I2Q9H344 312 aa11.62□□□□□ -0.55
LIMS1-205ENST00000410093 Q9N2K0 584 aa11.62□□□□□ -0.55
LIMS1-205ENST00000410093 RDH8Q9NYR8 311 aa11.62□□□□□ -0.55
LIMS1-205ENST00000410093 MTCH1Q9NZJ7 389 aa11.62□□□□□ -0.55
LIMS1-205ENST00000410093 MBD2Q9UBB5 411 aa11.62□□□□□ -0.55
LIMS1-205ENST00000410093 CSAG2Q9Y5P2 127 aa11.62□□□□□ -0.55
LIMS1-205ENST00000410093 ATRXP46100 2492 aa11.62□□□□□ -0.55
LIMS1-205ENST00000410093 IQCF6A8MYZ5 107 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 SHOXO15266 292 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 SMPD2O60906 423 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 C1QL1O75973 258 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 KNG1P01042 644 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 FAM87AP0C7U9 286 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 FCGR2CP31995 323 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 OPRM1P35372 400 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 P2RX3P56373 397 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 PIGPP57054 158 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 RND3P61587 244 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 PPP1CBP62140 327 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 PMP22Q01453 160 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 MZT1Q08AG7 82 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 BAMBIQ13145 260 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 IL15RAQ13261 267 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 SMCO1Q147U7 214 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 LRRC37A5PQ49AS3 106 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 RGS7BPQ6MZT1 257 aaPredicted RBP11.61□□□□□ -0.55
LIMS1-205ENST00000410093 MOB1BQ7L9L4 216 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 FAM58AQ8N1B3 248 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 POC1AQ8NBT0 407 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 DCUN1D4Q92564 292 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 AQP10Q96PS8 301 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 TUBD1Q9UJT1 453 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 FBXO9Q9UK97 447 aaPredicted RBP11.61□□□□□ -0.55
LIMS1-205ENST00000410093 ATP23Q9Y6H3 246 aa11.61□□□□□ -0.55
LIMS1-205ENST00000410093 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.6□□□□□ -0.55
LIMS1-205ENST00000410093 DUXBA0A1W2PPF3 345 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 hCG_1807616A0A1W2PRN6 198 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 TRDCB7Z8K6 153 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 B8ZZF3 427 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 F8VVB4 439 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 F8VWA3 439 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 IGKV3-15P01624 115 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 CRYABP02511 175 aaKnown RBP11.6□□□□□ -0.55
LIMS1-205ENST00000410093 PDGFAP04085 211 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 NMBP08949 121 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 HOXD4P09016 255 aaPredicted RBP11.6□□□□□ -0.55
LIMS1-205ENST00000410093 TPT1P13693 172 aaKnown RBP11.6□□□□□ -0.55
LIMS1-205ENST00000410093 S100GP29377 79 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 PRSS12P56730 875 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 ACSF3Q4G176 576 aaPredicted RBP11.6□□□□□ -0.55
LIMS1-205ENST00000410093 HAGHLQ6PII5 290 aaPredicted RBP11.6□□□□□ -0.55
LIMS1-205ENST00000410093 FIP1L1Q6UN15 594 aaKnown RBP11.6□□□□□ -0.55
LIMS1-205ENST00000410093 CCDC28AQ8IWP9 274 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 LGI3Q8N145 548 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 SPERTQ8NA61 448 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 RTN4IP1Q8WWV3 396 aaPredicted RBP11.6□□□□□ -0.55
LIMS1-205ENST00000410093 WDR13Q9H1Z4 485 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 RASL12Q9NYN1 266 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 PCDHB10Q9UN67 800 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 AMDHD2Q9Y303 409 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 TMED3Q9Y3Q3 217 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 MBD3L4A6NDZ8 208 aaPredicted RBP11.6□□□□□ -0.55
LIMS1-205ENST00000410093 MBD3L3A6NE82 208 aaPredicted RBP11.6□□□□□ -0.55
LIMS1-205ENST00000410093 MBD3L5A6NJ08 208 aaPredicted RBP11.6□□□□□ -0.55
LIMS1-205ENST00000410093 PPYP01298 95 aa11.6□□□□□ -0.55
LIMS1-205ENST00000410093 PI3P19957 117 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms