RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 FAM192AQ9GZU8 254 aa7.36□□□□□ -1.23
SNORD88A-201ENST00000408314 NCOR1P1Q9H4R4 102 aa7.36□□□□□ -1.23
SNORD88A-201ENST00000408314 ISG20L2Q9H9L3 353 aaKnown RBP7.36□□□□□ -1.23
SNORD88A-201ENST00000408314 AMBNQ9NP70 447 aa7.36□□□□□ -1.23
SNORD88A-201ENST00000408314 DIMT1Q9UNQ2 313 aaKnown RBP7.36□□□□□ -1.23
SNORD88A-201ENST00000408314 AMMECR1Q9Y4X0 333 aaPredicted RBP7.36□□□□□ -1.23
SNORD88A-201ENST00000408314 IGKV1-12A0A0C4DH73 117 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 ODAMA1E959 279 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 EFCAB10A6NFE3 127 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 LEUTXA8MZ59 168 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 OOSP1A8MZH6 123 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 TOR1AO14656 332 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 IGKV1D-12P01611 117 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 CSTBP04080 98 aaKnown RBP7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 LIMS3P0CW19 117 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 LIMS4P0CW20 117 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 PRRX1P54821 245 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 ZP1P60852 638 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 SLC34A1Q06495 639 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 SCN1BQ07699 218 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 RSU1Q15404 277 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 PAN3Q58A45 887 aaKnown RBP7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 KRBOX4Q5JUW0 171 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 LHFPL4Q7Z7J7 247 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 LINC00596Q86U02 117 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 DHRSXQ8N5I4 330 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 TPRX1Q8N7U7 411 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 OR52N1Q8NH53 320 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 C17orf50Q8WW18 174 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 APH1BQ8WW43 257 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 CYGBQ8WWM9 190 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 TMEM106AQ96A25 262 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 SMIM19Q96E16 107 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 TMEM80Q96HE8 168 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 SPACA5Q96QH8 159 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 NKX3-1Q99801 234 aaPredicted RBP7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 BARHL1Q9BZE3 327 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 RAB9BQ9NP90 201 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 TMEM138Q9NPI0 162 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 DPM3Q9P2X0 92 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 IL36RNQ9UBH0 155 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 AASSQ9UDR5 926 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 ZNF281Q9Y2X9 895 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 DSCAML1Q8TD84 2053 aa7.35□□□□□ -1.23
SNORD88A-201ENST00000408314 A0A0G2JK05 382 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 A6NDX4 124 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 H0YJX3 145 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 M0QZK8 103 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 SLC33A1O00400 549 aaPredicted RBP7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 GABRPO00591 440 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 WBP4O75554 376 aaKnown RBP7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 CDK2P24941 298 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 CD34P28906 385 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 C21orf33P30042 268 aaPredicted RBP7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 BDKRB2P30411 391 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 MNDAP41218 407 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 SOX2P48431 317 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 BDH1Q02338 343 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 PAX5Q02548 391 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 AESQ08117 197 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 SRSF4Q08170 494 aaKnown RBP7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 GPR176Q14439 515 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 PLA1AQ53H76 456 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 YIF1BQ5BJH7 314 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 ZNF529Q6P280 563 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 CRIP3Q6Q6R5 217 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 TCF23Q7RTU1 214 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 SATL1Q86VE3 508 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 C8orf59Q8N0T1 100 aaPredicted RBP7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 ABHD12Q8N2K0 398 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 KLHDC1Q8N7A1 406 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 OR10A7Q8NGE5 316 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 OR51A2Q8NGJ7 313 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 OR51T1Q8NGJ9 327 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 ZNF649Q9BS31 505 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 METTL9Q9H1A3 318 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 SPACA1Q9HBV2 294 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 BABAM2Q9NXR7 383 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 IL36GQ9NZH8 169 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 CNOT2Q9NZN8 540 aaKnown RBP7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 MEGF8Q7Z7M0 2845 aa7.34□□□□□ -1.23
SNORD88A-201ENST00000408314 A0A087X0M5 115 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 KBTBD11-OT1A0A1B0GTJ5 212 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 A0A1B0GX30 115 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 MEGF11A6BM72 1044 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 E9PI62 339 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 MYL12BO14950 172 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 FBXO24O75426 580 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 VSIG10L2P0DP72 767 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 CALCBP10092 127 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 MAPK3P27361 379 aaPredicted RBP7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 ZNF93P35789 620 aaPredicted RBP7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 GLP1RP43220 463 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 RIPK1Q13546 671 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 ATXN7L3Q14CW9 347 aaPredicted RBP7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 RCN1Q15293 331 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 MPV17LQ2QL34 196 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 Q499Y3 187 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 NHLRC3Q5JS37 347 aa7.33□□□□□ -1.24
SNORD88A-201ENST00000408314 DDI2Q5TDH0 399 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms