RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 PIGBOS1A0A0B4J2F0 54 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 J3QW42 95 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 BCL2L11O43521 198 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 CTSDP07339 412 aaPredicted RBP11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 GLI4P10075 376 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 MPGP29372 298 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 TIMP3P35625 211 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 RBMXP38159 391 aaKnown RBP11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 PDZK1IP1Q13113 114 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 BAMBIQ13145 260 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 SFRP5Q5T4F7 317 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 COLCA1Q6ZS62 124 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 SEM1Q6ZVN7 128 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 C1QL2Q7Z5L3 287 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 SGPP2Q8IWX5 399 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 MKXQ8IYA7 352 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 CCDC36Q8IYA8 594 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 C9orf106Q8NAJ2 232 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 PPP1R1CQ8WVI7 109 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 PIGCQ92535 297 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 SYT3Q9BQG1 590 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 ZNF286AQ9HBT8 521 aa11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 CHMP1AQ9HD42 196 aaPredicted RBP11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 ZNF701Q9NV72 531 aaPredicted RBP11.08□□□□□ -0.64
SMARCB1-203ENST00000407082 TRAV14DV4A0A0A6YYC5 116 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 A0A1W2PP11 408 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 hCG_1807616A0A1W2PRN6 198 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 MBD3L4A6NDZ8 208 aaPredicted RBP11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 MBD3L3A6NE82 208 aaPredicted RBP11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 MBD3L5A6NJ08 208 aaPredicted RBP11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 RAD51DO75771 328 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 CFDP00746 253 aaPredicted RBP11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 IFNA21P01568 189 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 ACKR3P25106 362 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 NTF4P34130 210 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 NPY4RP50391 375 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 AANATQ16613 207 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 SRSF7Q16629 238 aaKnown RBP eCLIP11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 MRPL21Q7Z2W9 205 aaKnown RBP11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 LINC00596Q86U02 117 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 ADAD2Q8NCV1 583 aaKnown RBP11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 OR10K1Q8NGX5 313 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 OR13G1Q8NGZ3 307 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 OR2AE1Q8NHA4 323 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 SPATA3Q8NHX4 192 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 MBD3L2Q8NHZ7 208 aaPredicted RBP11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 C2orf50Q96LR7 162 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 PLK3Q9H4B4 646 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 METTL8Q9H825 291 aaKnown RBP11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 RHOFQ9HBH0 211 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 SLC7A10Q9NS82 523 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 ANXA10Q9UJ72 324 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 NUP50Q9UKX7 468 aa11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 NSD1Q96L73 2696 aaPredicted RBP11.07□□□□□ -0.64
SMARCB1-203ENST00000407082 ZNF469Q96JG9 3925 aaPredicted RBP11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 C13orf42A0A1B0GVH6 325 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 C5orf63A6NC05 138 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 KRBOX1C9JBD0 128 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 I3L521 148 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 PDCD6O75340 191 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 CST4P01036 141 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 IFNA2P01563 188 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 RLN2P04090 185 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 CRHP06850 196 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 M6PRP20645 277 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 FUT3P21217 361 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 CHATP28329 748 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 CEACAM8P31997 349 aaPredicted RBP11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 APLNRP35414 380 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 SERPINF1P36955 418 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 GLP1RP43220 463 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 ZNF92Q03936 586 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 NKAPLQ5M9Q1 402 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 OR2A2Q6IF42 318 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 CRIP3Q6Q6R5 217 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 C17orf107Q6ZR85 190 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 RNF144BQ7Z419 303 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 TUSC5Q8IXB3 177 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 GCNT2Q8N0V5 402 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 OR51F2Q8NH61 342 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 ST8SIA2Q92186 375 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 RBPMSQ93062 196 aaKnown RBP11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 MRGPRFQ96AM1 343 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 PIK3IP1Q96FE7 263 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 ARPC5LQ9BPX5 153 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 DNTTIP1Q9H147 329 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 C5orf66Q9H5L9 145 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 DNAJB11Q9UBS4 358 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 COL6A5A8TX70 2615 aa11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 FN1P02751 2386 aaKnown RBP11.06□□□□□ -0.64
SMARCB1-203ENST00000407082 ARHGAP21Q5T5U3 1957 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 TRBV6-7A0A0A0MS04 114 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 POM121CA8CG34 1229 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 ZNF850A8MQ14 1090 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 EEF1E1-BLOC1S5C9J1V9 151 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 TAAR5O14804 337 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 LY6G6DO95868 133 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 UCP3P55916 312 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 NAAAQ02083 359 aa11.05□□□□□ -0.64
SMARCB1-203ENST00000407082 SMCO1Q147U7 214 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms