RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 GAL3ST2Q9H3Q3 398 aa4.13□□□□□ -1.75
PCDH11X-207ENST00000406881 NPDC1Q9NQX5 325 aaPredicted RBP4.13□□□□□ -1.75
PCDH11X-207ENST00000406881 BIN3Q9NQY0 253 aa4.13□□□□□ -1.75
PCDH11X-207ENST00000406881 ZNF629Q9UEG4 869 aaPredicted RBP4.13□□□□□ -1.75
PCDH11X-207ENST00000406881 NCOR1O75376 2440 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 GVINP1Q7Z2Y8 2422 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 AHCTF1Q8WYP5 2266 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 C9orf172C9J069 976 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 HAND1O96004 215 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 HRASP01112 189 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 PPYP01298 95 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 CD3EP07766 207 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 SLC25A4P12235 298 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 CD59P13987 128 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 BCL3P20749 454 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 VDAC1P21796 283 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 CHRNB4P30926 498 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 CEACAM6P40199 344 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 PSMB3P49720 205 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 DEFA6Q01524 100 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 SPANXN5Q5MJ07 72 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 TMEM65Q6PI78 240 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 OR10X1Q8NGY0 326 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 RGP1Q92546 391 aaPredicted RBP4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 SLC35E1Q96K37 410 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 SSX3Q99909 188 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 RASL12Q9NYN1 266 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 FBLN5Q9UBX5 448 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 KLK13Q9UKR3 277 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 ARHGEF17Q96PE2 2063 aaPredicted RBP4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 SPTBP11277 2137 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 TRAV38-1A0A0B4J264 116 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 IGHV3-64DA0A0J9YX35 117 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 SHISA3A0PJX4 238 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 C17orf51A8MQB3 221 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 AQP7O14520 342 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 CD74P04233 296 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 ZNF708P17019 499 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 UBE2KP61086 200 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 RPS11P62280 158 aaKnown RBP eCLIP4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 ERHP84090 104 aaKnown RBP4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 PDCD1Q15116 288 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 OR8G2PQ6IF36 304 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 Q6ZRG5 221 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 TIPARPQ7Z3E1 657 aaKnown RBP4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 C9orf62Q8N4C0 152 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 C1orf162Q8NEQ5 155 aaPredicted RBP4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 OR11H7Q8NGC8 314 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 MALSU1Q96EH3 234 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 TMEM68Q96MH6 324 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 TIMP4Q99727 224 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 ZNF649Q9BS31 505 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 NIPSNAP3BQ9BS92 247 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 ACTR3CQ9C0K3 210 aaPredicted RBP4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 SHARPINQ9H0F6 387 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 SMCO4Q9NRQ5 59 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 SLC2A8Q9NY64 477 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 RNF7Q9UBF6 113 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 V9GYS6 101 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 COL4A4P53420 1690 aaPredicted RBP4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 HEATR5BQ9P2D3 2071 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 CLEC18AA5D8T8 446 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 F6UZH7 168 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 ADH4P08319 380 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 FCGR3AP08637 254 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 OR5AC1P0C628 307 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 CD37P11049 281 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 OR3A1P47881 315 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 P2RY1P47900 373 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 UCP2P55851 309 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 RAB32Q13637 225 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 TGIF1Q15583 401 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 ATP6V1FQ16864 119 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 ACOT6Q3I5F7 207 aaPredicted RBP4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 SP6Q3SY56 376 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 ZNF385CQ66K41 422 aaPredicted RBP4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 TCTEX1D1Q8N7M0 179 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 CLEC18CQ8NCF0 446 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 LILRB1Q8NHL6 650 aaPredicted RBP4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 ZNRF4Q8WWF5 429 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 FBXO17Q96EF6 278 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 SDSLQ96GA7 329 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 C12orf57Q99622 126 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 COMMD5Q9GZQ3 224 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 FAM234AQ9H0X4 552 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 LPAR3Q9UBY5 353 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 TINAGQ9UJW2 476 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 KCNK7Q9Y2U2 307 aa4.12□□□□□ -1.75
PCDH11X-207ENST00000406881 EP300Q09472 2414 aaPredicted RBP4.11□□□□□ -1.75
PCDH11X-207ENST00000406881 TRAV20A0A0B4J274 112 aa4.11□□□□□ -1.75
PCDH11X-207ENST00000406881 IFNL4K9M1U5 179 aa4.11□□□□□ -1.75
PCDH11X-207ENST00000406881 M0R1X1 148 aa4.11□□□□□ -1.75
PCDH11X-207ENST00000406881 CDIPTO14735 213 aa4.11□□□□□ -1.75
PCDH11X-207ENST00000406881 TNFSF12O43508 249 aa4.11□□□□□ -1.75
PCDH11X-207ENST00000406881 SOX15O60248 233 aa4.11□□□□□ -1.75
PCDH11X-207ENST00000406881 MELTFP08582 738 aa4.11□□□□□ -1.75
PCDH11X-207ENST00000406881 SNRNP70P08621 437 aaKnown RBP4.11□□□□□ -1.75
PCDH11X-207ENST00000406881 RFPL3SP0C7P2 107 aa4.11□□□□□ -1.75
PCDH11X-207ENST00000406881 IGFBP3P17936 291 aaPredicted RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms