RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 TBR1Q16650 682 aa13.13□□□□□ -0.31
LIMK2-204ENST00000406516 OR10D3Q8NH80 312 aa13.13□□□□□ -0.31
LIMK2-204ENST00000406516 PLEKHA2Q9HB19 425 aa13.13□□□□□ -0.31
LIMK2-204ENST00000406516 TIMM10BQ9Y5J6 103 aa13.13□□□□□ -0.31
LIMK2-204ENST00000406516 USP24Q9UPU5 2620 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 hCG_38984A0A1B0GV85 526 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 E5RGE8 158 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 DNPH1O43598 174 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 TMEM42Q69YG0 159 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 ASCL4Q6XD76 172 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 SGCZQ96LD1 299 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 PRORYQ9H606 182 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 ZNF286AQ9HBT8 521 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 SLC7A11Q9UPY5 501 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 NSG2Q9Y328 171 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 SHANK1Q9Y566 2161 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 BOD1L1Q8NFC6 3051 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 RFC3P40938 356 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 Q6ZPA2 131 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 SKA3Q8IX90 412 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 UBAC2Q8NBM4 344 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 OR52M1Q8NGK5 317 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 RXFP4Q8TDU9 374 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 GALNT14Q96FL9 552 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 KIRREL1Q96J84 757 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 AKR1E2Q96JD6 320 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 ZNF442Q9H7R0 627 aa13.12□□□□□ -0.31
LIMK2-204ENST00000406516 ZNHIT1O43257 154 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 NME2P1O60361 137 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 RAB13P51153 203 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 SOX8P57073 446 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 ZNF616Q08AN1 781 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 ETV3LQ6ZN32 361 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 LIAT1Q6ZQX7 453 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 ABHD3Q8WU67 409 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 SECTM1Q8WVN6 248 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 CACNA1GO43497 2377 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 NBEAQ8NFP9 2946 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 ZNF587BE7ETH6 402 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 PHF1O43189 567 aaPredicted RBP13.11□□□□□ -0.31
LIMK2-204ENST00000406516 PDCD6O75340 191 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 OR7C1O76099 320 aaPredicted RBP13.11□□□□□ -0.31
LIMK2-204ENST00000406516 PPT1P50897 306 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 FUT6P51993 359 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 DVL1P1P54792 670 aaPredicted RBP13.11□□□□□ -0.31
LIMK2-204ENST00000406516 MALLQ13021 153 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 MEX3BQ6ZN04 569 aaKnown RBP13.11□□□□□ -0.31
LIMK2-204ENST00000406516 CALHM1Q8IU99 346 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 ZFP82Q8N141 532 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 OR2V1Q8NHB1 315 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 GLYATL2Q8WU03 294 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 ZNF845Q96IR2 970 aaPredicted RBP13.11□□□□□ -0.31
LIMK2-204ENST00000406516 SUCNR1Q9BXA5 334 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 ZNF552Q9H707 407 aaPredicted RBP13.11□□□□□ -0.31
LIMK2-204ENST00000406516 WFDC1Q9HC57 220 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 ITPR1Q14643 2758 aa13.11□□□□□ -0.31
LIMK2-204ENST00000406516 LRRC3CA6NJW4 275 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 TSPAN15O95858 294 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 CRYBA1P05813 215 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 SPP1P10451 314 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 EDN3P14138 238 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 AADACP22760 399 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 AKR1C3P42330 323 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 KRTAP27-1Q3LI81 207 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 MIDNQ504T8 468 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 FBXW12Q6X9E4 464 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 C2CD4CQ8TF44 421 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 C18orf12Q96KH6 178 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 GPR35Q9HC97 309 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 FAM212BQ9NTI7 297 aaPredicted RBP13.1□□□□□ -0.31
LIMK2-204ENST00000406516 DOCK10Q96BY6 2186 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 FAM157AC9JC47 383 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 H7C1Q1 480 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 GLP1RP43220 463 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 NPBWR2P48146 333 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 FHITP49789 147 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 CLDN15P56746 228 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 RBM11P57052 281 aaKnown RBP13.1□□□□□ -0.31
LIMK2-204ENST00000406516 HERV-K104P61576 105 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 PEA15Q15121 130 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 LINC00696Q6ZRV3 163 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 SLC25A26Q70HW3 274 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 MOB3AQ96BX8 217 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 MSI2Q96DH6 328 aaKnown RBP13.1□□□□□ -0.31
LIMK2-204ENST00000406516 DEPPQ9NTK1 212 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 ZDHHC8Q9ULC8 765 aa13.1□□□□□ -0.31
LIMK2-204ENST00000406516 ZNF816-ZNF321PA0A0X1KG74 233 aa13.09□□□□□ -0.31
LIMK2-204ENST00000406516 MEX3AA1L020 520 aaKnown RBP13.09□□□□□ -0.31
LIMK2-204ENST00000406516 DUSP1P28562 367 aa13.09□□□□□ -0.31
LIMK2-204ENST00000406516 ACER2Q5QJU3 275 aa13.09□□□□□ -0.31
LIMK2-204ENST00000406516 AVPI1Q5T686 147 aa13.09□□□□□ -0.31
LIMK2-204ENST00000406516 ABLIM2Q6H8Q1 611 aa13.09□□□□□ -0.31
LIMK2-204ENST00000406516 LGI3Q8N145 548 aa13.09□□□□□ -0.31
LIMK2-204ENST00000406516 ZNF611Q8N823 705 aa13.09□□□□□ -0.31
LIMK2-204ENST00000406516 SYT3Q9BQG1 590 aa13.09□□□□□ -0.31
LIMK2-204ENST00000406516 SH3BGRL3Q9H299 93 aa13.09□□□□□ -0.31
LIMK2-204ENST00000406516 STARD10Q9Y365 291 aa13.09□□□□□ -0.31
LIMK2-204ENST00000406516 KLF2Q9Y5W3 355 aaPredicted RBP13.09□□□□□ -0.31
LIMK2-204ENST00000406516 EPG5Q9HCE0 2579 aa13.09□□□□□ -0.31
LIMK2-204ENST00000406516 BORCS7-ASMTA0A0B4J1R7 106 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms