RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 FAM3DQ96BQ1 224 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 SNX22Q96L94 193 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 GAFA1Q96PS6 74 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 BCL7BQ9BQE9 202 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 TMEM59Q9BXS4 323 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 SELENOIQ9C0D9 397 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 DAPK2Q9UIK4 370 aa8.75□□□□□ -1.01
RPAIN-204ENST00000405578 TRBV23-1A0A0A0MS06 115 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 SHISA3A0PJX4 238 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 TMEM89A2RUT3 159 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 FAM90A10PA6NDY2 464 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 FAM90A18PA6NE21 464 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 FAM90A16PA6NEW6 464 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 CCDC160A6NGH7 325 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 FAM90A20PA6NIJ5 464 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 FAM90A8PA6NJQ4 464 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 FAM90A7PA6NKC0 464 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 FAM90A22PA8MWA6 464 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 FAM90A12PA8MX19 464 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 FAM90A5PA8MXJ8 464 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 FAM90A23PA8MXZ1 464 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 K7N7A8 449 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 SIRPB1O00241 398 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 ENSAO43768 121 aaKnown RBP8.74□□□□□ -1.01
RPAIN-204ENST00000405578 OR2H2O95918 312 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 TK1P04183 234 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 FAM90A15PP0C7V4 464 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 FAM90A13PP0C7W8 464 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 FAM90A14PP0C7W9 464 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 FAM90A24PP0C7X0 464 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 VSIG8P0DPA2 414 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 KCNJ3P48549 501 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 CEBPDP49716 269 aaPredicted RBP8.74□□□□□ -1.01
RPAIN-204ENST00000405578 DVL1P1P54792 670 aaPredicted RBP8.74□□□□□ -1.01
RPAIN-204ENST00000405578 TMBIM6P55061 237 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 VBP1P61758 197 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 NCS1P62166 190 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 RBM39Q14498 530 aaKnown RBP8.74□□□□□ -1.01
RPAIN-204ENST00000405578 GRK1Q15835 563 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 PIGYQ3MUY2 71 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 PAN3Q58A45 887 aaKnown RBP8.74□□□□□ -1.01
RPAIN-204ENST00000405578 ZNF841Q6ZN19 808 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 BTN2A1Q7KYR7 527 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 OR8H2Q8N162 312 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 OR51D1Q8NGF3 324 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 SLC25A28Q96A46 364 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 GFI1Q99684 422 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 BANF2Q9H503 90 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 RNF167Q9H6Y7 350 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 LIN7BQ9HAP6 207 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 HIF1ANQ9NWT6 349 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 IL36RNQ9UBH0 155 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 CTSZQ9UBR2 303 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 RAB22AQ9UL26 194 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 POLR3KQ9Y2Y1 108 aaPredicted RBP8.74□□□□□ -1.01
RPAIN-204ENST00000405578 MAB21L2Q9Y586 359 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 NOTCH1P46531 2555 aa8.74□□□□□ -1.01
RPAIN-204ENST00000405578 A0A1W2PQ09 198 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 SMIM30A4D0T7 59 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 METTL21EPA6NDL7 271 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 MCRIP1C9JLW8 97 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 J3QLI3 93 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 MGST3O14880 152 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 GEMIN2O14893 280 aaKnown RBP8.73□□□□□ -1.01
RPAIN-204ENST00000405578 AMY2BP19961 511 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 LMO1P25800 156 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 CLDN12P56749 244 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 SCAND1P57086 179 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 SEC61A1P61619 476 aaKnown RBP8.73□□□□□ -1.01
RPAIN-204ENST00000405578 RPS27AP62979 156 aaKnown RBP8.73□□□□□ -1.01
RPAIN-204ENST00000405578 TAF9Q16594 264 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 C2orf76Q3KRA6 126 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 MIDNQ504T8 468 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 ATAD3CQ5T2N8 411 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 IDNKQ5T6J7 187 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 DCAF12L2Q5VW00 463 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 SLC16A12Q6ZSM3 486 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 CMTM4Q8IZR5 234 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 TMEM104Q8NE00 496 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 NEK7Q8TDX7 302 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 RAB40AQ8WXH6 277 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 AP3S1Q92572 193 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 PTX4Q96A99 478 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 DMRTB1Q96MA1 342 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 C1orf147Q96MC9 270 aaPredicted RBP8.73□□□□□ -1.01
RPAIN-204ENST00000405578 NEDD4LQ96PU5 975 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 NUDT16L1Q9BRJ7 211 aaKnown RBP8.73□□□□□ -1.01
RPAIN-204ENST00000405578 BARHL1Q9BZE3 327 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 IFT22Q9H7X7 185 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 FBLN5Q9UBX5 448 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 ETV7Q9Y603 341 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 PRKDCP78527 4128 aaKnown RBP8.73□□□□□ -1.01
RPAIN-204ENST00000405578 TRRAPQ9Y4A5 3859 aa8.73□□□□□ -1.01
RPAIN-204ENST00000405578 A0A0A6YYJ9 748 aa8.72□□□□□ -1.01
RPAIN-204ENST00000405578 IGHV2-70DA0A0C4DH43 119 aa8.72□□□□□ -1.01
RPAIN-204ENST00000405578 A0A1W2PP11 408 aa8.72□□□□□ -1.01
RPAIN-204ENST00000405578 hCG_1809904A0A1W2PP81 198 aa8.72□□□□□ -1.01
RPAIN-204ENST00000405578 A0A1W2PPE2 198 aa8.72□□□□□ -1.01
RPAIN-204ENST00000405578 A0A1W2PR64 198 aa8.72□□□□□ -1.01
RPAIN-204ENST00000405578 A0A1W2PRV1 198 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms