RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 FAM90A20PA6NIJ5 464 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 FAM90A8PA6NJQ4 464 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 FAM90A7PA6NKC0 464 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 LRRC30A6NM36 301 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 FAM90A22PA8MWA6 464 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 FAM90A12PA8MX19 464 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 FAM90A5PA8MXJ8 464 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 FAM90A23PA8MXZ1 464 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 SDCBPO00560 298 aaPredicted RBP3.12□□□□□ -1.91
RTN4-208ENST00000404909 NOS1APO75052 506 aaPredicted RBP3.12□□□□□ -1.91
RTN4-208ENST00000404909 IFNA6P05013 189 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 FAM90A15PP0C7V4 464 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 FAM90A13PP0C7W8 464 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 FAM90A14PP0C7W9 464 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 FAM90A24PP0C7X0 464 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 LOXP28300 417 aaPredicted RBP3.12□□□□□ -1.91
RTN4-208ENST00000404909 CD80P33681 288 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 BTCP35070 178 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 OR3A3P47888 321 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 ARPC4P59998 168 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 TSPAN5P62079 268 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 SSBP1Q04837 148 aaKnown RBP3.12□□□□□ -1.91
RTN4-208ENST00000404909 IL13RA2Q14627 380 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 MICBQ29980 383 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 CHRFAM7AQ494W8 412 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 RNASE10Q5GAN6 216 aaKnown RBP3.12□□□□□ -1.91
RTN4-208ENST00000404909 OR11L1Q8NGX0 322 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 FAM222BQ8WU58 562 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 CCDC107Q8WV48 283 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 SNAPC3Q92966 411 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 DACT3Q96B18 629 aaPredicted RBP3.12□□□□□ -1.91
RTN4-208ENST00000404909 DIRC2Q96SL1 478 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 OCSTAMPQ9BR26 566 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 SPACA1Q9HBV2 294 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 C12orf4Q9NQ89 552 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 RNF7Q9UBF6 113 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 CELSR2Q9HCU4 2923 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 IGKV1D-8A0A087WSZ0 117 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 TRAV39A0A0B4J263 110 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 OR2AT4A6NND4 320 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 SRRM5B3KS81 715 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 SLC33A1O00400 549 aaPredicted RBP3.12□□□□□ -1.91
RTN4-208ENST00000404909 HPXP02790 462 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 TCRBP04435 133 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 RLN1P04808 185 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 SOD3P08294 240 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 FCGR3AP08637 254 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 GATA4P43694 442 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 CBX5P45973 191 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 RBM39Q14498 530 aaKnown RBP3.12□□□□□ -1.91
RTN4-208ENST00000404909 ZNF146Q15072 292 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 EFNB3Q15768 340 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 SPIN3Q5JUX0 258 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 FAM209AQ5JX71 171 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 Q6P435 159 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 IDO2Q6ZQW0 420 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 LINC00596Q86U02 117 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 PRR18Q8N4B5 295 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 TMEM229BQ8NBD8 167 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 OR5H2Q8NGV7 314 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 UPRTQ96BW1 309 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 C7orf50Q9BRJ6 194 aaKnown RBP3.12□□□□□ -1.91
RTN4-208ENST00000404909 GINS4Q9BRT9 223 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 TMEM204Q9BSN7 226 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 RHOFQ9HBH0 211 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 HES4Q9HCC6 221 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.12□□□□□ -1.912e-7■■■□□ 17.5
RTN4-208ENST00000404909 FAIMQ9NVQ4 179 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 METRNQ9UJH8 293 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 FLVCR2Q9UPI3 526 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 NPTNQ9Y639 398 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 TENM4Q6N022 2769 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 CSMD2Q7Z408 3487 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 DYSFO75923 2080 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 NAV2Q8IVL1 2488 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 NAP1L6A6NFF2 107 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 A6NNC1 897 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 INMT-MINDY4F8WBC2 141 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 LYNX1G3V0Z9 82 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 H3BUI4 141 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.12□□□□□ -1.91
RTN4-208ENST00000404909 PSPNO60542 156 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 LY6HO94772 140 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 LYNX1P0DP58 116 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 PSG2P11465 335 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 PRDX2P32119 198 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 COL10A1Q03692 680 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 EDDM3AQ14507 147 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 TESK1Q15569 626 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 SWI5Q1ZZU3 235 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 PLA1AQ53H76 456 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 AGAP6Q5VW22 663 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 C5orf24Q7Z6I8 188 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 HOGA1Q86XE5 327 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 CD177Q8N6Q3 437 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 TPRX1Q8N7U7 411 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 OR10Z1Q8NGY1 313 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 SLC6A7Q99884 636 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 EHFQ9NZC4 300 aa3.12□□□□□ -1.91
RTN4-208ENST00000404909 RCC2Q9P258 522 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms