RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 COL19A1Q14993 1142 aa16.12■□□□□ 0.17
USP48-204ENST00000400301 ADIRFQ15847 76 aa16.12■□□□□ 0.17
USP48-204ENST00000400301 GUCA2BQ16661 112 aa16.12■□□□□ 0.17
USP48-204ENST00000400301 LY6G6FQ5SQ64 297 aa16.12■□□□□ 0.17
USP48-204ENST00000400301 PAQR4Q8N4S7 273 aaPredicted RBP16.12■□□□□ 0.17
USP48-204ENST00000400301 OR4A16Q8NH70 328 aa16.12■□□□□ 0.17
USP48-204ENST00000400301 CCL28Q9NRJ3 127 aa16.12■□□□□ 0.17
USP48-204ENST00000400301 AMDHD2Q9Y303 409 aa16.12■□□□□ 0.17
USP48-204ENST00000400301 MEX3AA1L020 520 aaKnown RBP16.12■□□□□ 0.17
USP48-204ENST00000400301 NKX2-6A6NCS4 301 aa16.12■□□□□ 0.17
USP48-204ENST00000400301 ABCD4O14678 606 aa16.12■□□□□ 0.17
USP48-204ENST00000400301 SLC25A53Q5H9E4 307 aa16.12■□□□□ 0.17
USP48-204ENST00000400301 SARAFQ96BY9 339 aa16.12■□□□□ 0.17
USP48-204ENST00000400301 ZNF319Q9P2F9 582 aa16.12■□□□□ 0.17
USP48-204ENST00000400301 PHF3Q92576 2039 aaKnown RBP16.12■□□□□ 0.17
USP48-204ENST00000400301 NDUFA6P56556 154 aa16.11■□□□□ 0.17
USP48-204ENST00000400301 LHX4Q969G2 390 aa16.11■□□□□ 0.17
USP48-204ENST00000400301 Q96M66 194 aa16.11■□□□□ 0.17
USP48-204ENST00000400301 MPC1Q9Y5U8 109 aa16.11■□□□□ 0.17
USP48-204ENST00000400301 P2RY1P47900 373 aa16.11■□□□□ 0.17
USP48-204ENST00000400301 ZNF239Q16600 458 aaKnown RBP16.11■□□□□ 0.17
USP48-204ENST00000400301 MRPL14Q6P1L8 145 aaKnown RBP16.11■□□□□ 0.17
USP48-204ENST00000400301 SLC35G3Q8N808 338 aa16.11■□□□□ 0.17
USP48-204ENST00000400301 SEC11CQ9BY50 192 aa16.11■□□□□ 0.17
USP48-204ENST00000400301 LOC390937A0A1W2PQ73 354 aa16.11■□□□□ 0.17
USP48-204ENST00000400301 KRASP01116 189 aa16.11■□□□□ 0.17
USP48-204ENST00000400301 IL2RAP01589 272 aa16.11■□□□□ 0.17
USP48-204ENST00000400301 ZNF735P0CB33 412 aa16.11■□□□□ 0.17
USP48-204ENST00000400301 ZNF787Q6DD87 383 aa16.11■□□□□ 0.17
USP48-204ENST00000400301 ZNF106Q9H2Y7 1883 aaKnown RBP16.11■□□□□ 0.17
USP48-204ENST00000400301 FAM74A7A6NL05 159 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 LYZL6O75951 148 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 FAM74A3Q4VXF1 159 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 ZNF524Q96C55 264 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 ZNF837Q96EG3 531 aaPredicted RBP16.1■□□□□ 0.17
USP48-204ENST00000400301 GPR87Q9BY21 358 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 PLEKHA3Q9HB20 300 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 TMEM100Q9NV29 134 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 R4GN57 208 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 CLEC18AA5D8T8 446 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 TRDCB7Z8K6 153 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 VDAC1P21796 283 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 DCAF10Q5QP82 559 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 CLEC18CQ8NCF0 446 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 FRZBQ92765 325 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 C17orf112F2Z3M2 114 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 NGFP01138 241 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 KCNJ3P48549 501 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 TMEM267Q0VDI3 215 aaPredicted RBP16.1■□□□□ 0.17
USP48-204ENST00000400301 OR8B8Q15620 311 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 IGSF11Q5DX21 431 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 SSX9Q7RTT3 188 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 TMEM54Q969K7 222 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 GALMQ96C23 342 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 C12orf57Q99622 126 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 CACNG5Q9UF02 275 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 TRAV39A0A0B4J263 110 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 ZIC3O60481 467 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 PSMB3P49720 205 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 USF2Q15853 346 aaPredicted RBP16.1■□□□□ 0.17
USP48-204ENST00000400301 ZNF718Q3SXZ3 478 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 HIKESHIQ53FT3 197 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 TMPRSS7Q7RTY8 843 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 Q8IYB0 196 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 PUSL1Q8N0Z8 303 aaKnown RBP16.1■□□□□ 0.17
USP48-204ENST00000400301 OR10V1Q8NGI7 309 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 WNT2BQ93097 391 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 SLC35B3Q9H1N7 401 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 OBSL1O75147 1896 aa16.1■□□□□ 0.17
USP48-204ENST00000400301 GPR37O15354 613 aa16.09■□□□□ 0.17
USP48-204ENST00000400301 CEACAM6P40199 344 aa16.09■□□□□ 0.17
USP48-204ENST00000400301 ZNF816Q0VGE8 651 aaPredicted RBP16.09■□□□□ 0.17
USP48-204ENST00000400301 ZNF468Q5VIY5 522 aaPredicted RBP16.09■□□□□ 0.17
USP48-204ENST00000400301 ZNF561Q8N587 486 aa16.09■□□□□ 0.17
USP48-204ENST00000400301 FADS6Q8N9I5 356 aa16.09■□□□□ 0.17
USP48-204ENST00000400301 MALSU1Q96EH3 234 aa16.09■□□□□ 0.17
USP48-204ENST00000400301 RNF222A6NCQ9 220 aa16.09■□□□□ 0.17
USP48-204ENST00000400301 KCNMB1Q16558 191 aa16.09■□□□□ 0.17
USP48-204ENST00000400301 EIF2S3LQ2VIR3 472 aaKnown RBP16.09■□□□□ 0.17
USP48-204ENST00000400301 HES3Q5TGS1 186 aa16.09■□□□□ 0.17
USP48-204ENST00000400301 PRAMEF5Q5TYX0 476 aa16.09■□□□□ 0.17
USP48-204ENST00000400301 PRAMEF6Q5VXH4 476 aa16.09■□□□□ 0.17
USP48-204ENST00000400301 FAM166AQ6J272 317 aa16.09■□□□□ 0.17
USP48-204ENST00000400301 ZNF488Q96MN9 340 aa16.09■□□□□ 0.17
USP48-204ENST00000400301 RPL36A-HNRNPH2H7BZ11 118 aa16.09■□□□□ 0.17
USP48-204ENST00000400301 MPV17LQ2QL34 196 aa16.09■□□□□ 0.17
USP48-204ENST00000400301 AQP10Q96PS8 301 aa16.09■□□□□ 0.17
USP48-204ENST00000400301 TAAR3PQ9P1P4 343 aa16.09■□□□□ 0.17
USP48-204ENST00000400301 POMT1Q9Y6A1 747 aa16.09■□□□□ 0.17
USP48-204ENST00000400301 CDRT15L2A8MXV6 281 aa16.08■□□□□ 0.17
USP48-204ENST00000400301 CDS2O95674 445 aa16.08■□□□□ 0.17
USP48-204ENST00000400301 MT-CO2P00403 227 aa16.08■□□□□ 0.17
USP48-204ENST00000400301 RFPL3SP0C7P2 107 aa16.08■□□□□ 0.17
USP48-204ENST00000400301 RIPPLY2Q5TAB7 128 aa16.08■□□□□ 0.17
USP48-204ENST00000400301 C17orf78Q8N4C9 275 aa16.08■□□□□ 0.17
USP48-204ENST00000400301 ERGIC1Q969X5 290 aa16.08■□□□□ 0.17
USP48-204ENST00000400301 IMMP1LQ96LU5 166 aa16.08■□□□□ 0.17
USP48-204ENST00000400301 GCM1Q9NP62 436 aa16.08■□□□□ 0.17
USP48-204ENST00000400301 BTBD17A6NE02 478 aa16.08■□□□□ 0.16
USP48-204ENST00000400301 MSGN1A6NI15 193 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms