RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 ZNF646O15015 1829 aaPredicted RBP8.81□□□□□ -1
PTPRM-203ENST00000400060 COL11A1P12107 1806 aaPredicted RBP8.81□□□□□ -1
PTPRM-203ENST00000400060 ARID2Q68CP9 1835 aa8.81□□□□□ -1
PTPRM-203ENST00000400060 A0A1W2PQU0 124 aa8.81□□□□□ -1
PTPRM-203ENST00000400060 RAMP1O60894 148 aa8.81□□□□□ -1
PTPRM-203ENST00000400060 APCSP02743 223 aa8.81□□□□□ -1
PTPRM-203ENST00000400060 TCN2P20062 427 aa8.81□□□□□ -1
PTPRM-203ENST00000400060 GCH1P30793 250 aa8.81□□□□□ -1
PTPRM-203ENST00000400060 RND2P52198 227 aa8.81□□□□□ -1
PTPRM-203ENST00000400060 CST6Q15828 149 aa8.81□□□□□ -1
PTPRM-203ENST00000400060 HNRNPA1L2Q32P51 320 aaKnown RBP8.81□□□□□ -1
PTPRM-203ENST00000400060 RTN4RL1Q86UN2 441 aaPredicted RBP8.81□□□□□ -1
PTPRM-203ENST00000400060 RHBDD1Q8TEB9 315 aa8.81□□□□□ -1
PTPRM-203ENST00000400060 THAP3Q8WTV1 239 aaPredicted RBP8.81□□□□□ -1
PTPRM-203ENST00000400060 MRPL18Q9H0U6 180 aaKnown RBP8.81□□□□□ -1
PTPRM-203ENST00000400060 TIMM9Q9Y5J7 89 aa8.81□□□□□ -1
PTPRM-203ENST00000400060 LINC01553A4QN01 128 aa8.81□□□□□ -1
PTPRM-203ENST00000400060 PPIHO43447 177 aaKnown RBP8.81□□□□□ -1
PTPRM-203ENST00000400060 OR7C1O76099 320 aaPredicted RBP8.81□□□□□ -1
PTPRM-203ENST00000400060 TMEM52BQ4KMG9 183 aa8.81□□□□□ -1
PTPRM-203ENST00000400060 RAET1LQ5VY80 246 aa8.81□□□□□ -1
PTPRM-203ENST00000400060 S100A7AQ86SG5 101 aa8.81□□□□□ -1
PTPRM-203ENST00000400060 OR13G1Q8NGZ3 307 aa8.81□□□□□ -1
PTPRM-203ENST00000400060 C5orf66Q9H5L9 145 aa8.81□□□□□ -1
PTPRM-203ENST00000400060 HRASLS2Q9NWW9 162 aa8.81□□□□□ -1
PTPRM-203ENST00000400060 TRIP11Q15643 1979 aa8.81□□□□□ -1
PTPRM-203ENST00000400060 ZNF236Q9UL36 1845 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 IFITM10A6NMD0 228 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 TOX3O15405 576 aaPredicted RBP8.8□□□□□ -1
PTPRM-203ENST00000400060 HCRTR1O43613 425 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 ISG15P05161 165 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 CLEC3BP05452 202 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 NR0B2Q15466 257 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 ZNF141Q15928 474 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 NNATQ16517 81 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 PRAMEF20Q5VT98 475 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 PARS2Q7L3T8 475 aaKnown RBP8.8□□□□□ -1
PTPRM-203ENST00000400060 OR10S1Q8NGN2 331 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 SGMS2Q8NHU3 365 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 SFRP2Q96HF1 295 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 WSB2Q9NYS7 404 aaPredicted RBP8.8□□□□□ -1
PTPRM-203ENST00000400060 A0A0A6YYC8 382 aaPredicted RBP8.8□□□□□ -1
PTPRM-203ENST00000400060 A0A1W2PRS3 328 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 DPRXA6NFQ7 191 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 B4DGG1 531 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 I3L1I5 382 aaPredicted RBP8.8□□□□□ -1
PTPRM-203ENST00000400060 NUDT3O95989 172 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 ID4P47928 161 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 EMDP50402 254 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 LDLRAD2Q5SZI1 272 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 METRNLQ641Q3 311 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 MBNL1Q9NR56 388 aaKnown RBP8.8□□□□□ -1
PTPRM-203ENST00000400060 PLEK2Q9NYT0 353 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 TMEM202A6NGA9 273 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 C17orf105B2RV13 164 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 MPPED1O15442 326 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 CXCL1P09341 107 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 HTR1DP28221 377 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 GPR12P47775 334 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 EXT1Q16394 746 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 C1orf185Q5T7R7 199 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 MARCH3Q86UD3 253 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 VASH2Q86V25 355 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 SP7Q8TDD2 431 aaPredicted RBP8.8□□□□□ -1
PTPRM-203ENST00000400060 ALG14Q96F25 216 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 SAP30LQ9HAJ7 183 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 ZNF816-ZNF321PA0A0X1KG74 233 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 MSGN1A6NI15 193 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 H3BMH7 237 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 VSIG8P0DPA2 414 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 TDGF1P13385 188 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 CLDN15P56746 228 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 NTHL1P78549 312 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 PLP2Q04941 152 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 RUNX3Q13761 415 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 ICAM4Q14773 271 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 MMABQ96EY8 250 aaPredicted RBP8.8□□□□□ -1
PTPRM-203ENST00000400060 RCC1LQ96I51 464 aaKnown RBP8.8□□□□□ -1
PTPRM-203ENST00000400060 INSM2Q96T92 566 aaPredicted RBP8.8□□□□□ -1
PTPRM-203ENST00000400060 PRSS27Q9BQR3 290 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 SLC2A4RGQ9NR83 387 aa8.8□□□□□ -1
PTPRM-203ENST00000400060 LOC102724200A0A096LPH7 203 aaPredicted RBP8.79□□□□□ -1
PTPRM-203ENST00000400060 UPK3AO75631 287 aa8.79□□□□□ -1
PTPRM-203ENST00000400060 S1PR2O95136 353 aa8.79□□□□□ -1
PTPRM-203ENST00000400060 FGF8P55075 233 aaPredicted RBP8.79□□□□□ -1
PTPRM-203ENST00000400060 TMEM252Q8N6L7 170 aa8.79□□□□□ -1
PTPRM-203ENST00000400060 KCNS1Q96KK3 526 aa8.79□□□□□ -1
PTPRM-203ENST00000400060 TSPAN32Q96QS1 320 aa8.79□□□□□ -1
PTPRM-203ENST00000400060 TAAR6Q96RI8 345 aa8.79□□□□□ -1
PTPRM-203ENST00000400060 FLRT3Q9NZU0 649 aa8.79□□□□□ -1
PTPRM-203ENST00000400060 C19orf25Q9UFG5 118 aaPredicted RBP8.79□□□□□ -1
PTPRM-203ENST00000400060 MRPS16Q9Y3D3 137 aaKnown RBP8.79□□□□□ -1
PTPRM-203ENST00000400060 K7N7A8 449 aa8.79□□□□□ -1
PTPRM-203ENST00000400060 MLF1P58340 268 aa8.79□□□□□ -1
PTPRM-203ENST00000400060 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.79□□□□□ -1
PTPRM-203ENST00000400060 MST1LQ2TV78 715 aa8.79□□□□□ -1
PTPRM-203ENST00000400060 OR4A16Q8NH70 328 aa8.79□□□□□ -1
PTPRM-203ENST00000400060 ZNF391Q9UJN7 358 aa8.79□□□□□ -1
PTPRM-203ENST00000400060 ANKRD36A6QL64 1941 aa8.79□□□□□ -1
PTPRM-203ENST00000400060 TRAV1-1A0A0B4J248 108 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms