RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 MAFIPQ8WZ33 124 aa12.97□□□□□ -0.33
COL25A1-201ENST00000399126 SNRNP40Q96DI7 357 aaKnown RBP12.97□□□□□ -0.33
COL25A1-201ENST00000399126 Q96M66 194 aa12.97□□□□□ -0.33
COL25A1-201ENST00000399126 SSX3Q99909 188 aa12.97□□□□□ -0.33
COL25A1-201ENST00000399126 METTL9Q9H1A3 318 aa12.97□□□□□ -0.33
COL25A1-201ENST00000399126 ZNF222Q9UK12 451 aa12.97□□□□□ -0.33
COL25A1-201ENST00000399126 ZNF736B4DX44 427 aaPredicted RBP12.96□□□□□ -0.33
COL25A1-201ENST00000399126 NDUFB6O95139 128 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 NKAPLQ5M9Q1 402 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 TMEM229BQ8NBD8 167 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 DMBX1Q8NFW5 382 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 OR51F2Q8NH61 342 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 HS3ST6Q96QI5 342 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 NEU1Q99519 415 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 GINS4Q9BRT9 223 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 TM2D1Q9BX74 207 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 CDH20Q9HBT6 801 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 ASF1BQ9NVP2 202 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 ZNF230Q9UIE0 474 aaPredicted RBP12.96□□□□□ -0.33
COL25A1-201ENST00000399126 PLCE1Q9P212 2302 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 F8VVB4 439 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 F8VWA3 439 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 IGKV3-15P01624 115 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 AMY2AP04746 511 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 ZNF735P0CB33 412 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 DEFA5Q01523 94 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 RBMS3Q6XE24 437 aaKnown RBP12.96□□□□□ -0.33
COL25A1-201ENST00000399126 ZDHHC23Q8IYP9 409 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 SLC6A7Q99884 636 aa12.96□□□□□ -0.33
COL25A1-201ENST00000399126 VRK1Q99986 396 aaPredicted RBP12.96□□□□□ -0.33
COL25A1-201ENST00000399126 SEBOXQ9HB31 216 aaPredicted RBP12.96□□□□□ -0.33
COL25A1-201ENST00000399126 GEMIN2O14893 280 aaKnown RBP12.96□□□□□ -0.34
COL25A1-201ENST00000399126 SCGNO76038 276 aa12.96□□□□□ -0.34
COL25A1-201ENST00000399126 CSTBP04080 98 aaKnown RBP12.96□□□□□ -0.34
COL25A1-201ENST00000399126 PVALBP20472 110 aaPredicted RBP12.96□□□□□ -0.34
COL25A1-201ENST00000399126 CA6P23280 308 aa12.96□□□□□ -0.34
COL25A1-201ENST00000399126 FAUP35544 74 aaKnown RBP12.96□□□□□ -0.34
COL25A1-201ENST00000399126 SSBP1Q04837 148 aaKnown RBP12.96□□□□□ -0.34
COL25A1-201ENST00000399126 BHLHA15Q7RTS1 189 aaPredicted RBP12.96□□□□□ -0.34
COL25A1-201ENST00000399126 DOLPP1Q86YN1 238 aa12.96□□□□□ -0.34
COL25A1-201ENST00000399126 FBXL14Q8N1E6 418 aa12.96□□□□□ -0.34
COL25A1-201ENST00000399126 DYRK2Q92630 601 aa12.96□□□□□ -0.34
COL25A1-201ENST00000399126 CMSS1Q9BQ75 279 aaKnown RBP12.96□□□□□ -0.34
COL25A1-201ENST00000399126 HDHD3Q9BSH5 251 aaPredicted RBP12.96□□□□□ -0.34
COL25A1-201ENST00000399126 PECRQ9BY49 303 aa12.96□□□□□ -0.34
COL25A1-201ENST00000399126 A0A1W2PN81 502 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 ZNF732B4DXR9 585 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 CST4P01036 141 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 CECR9P0C854 216 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 GLI4P10075 376 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 SPP1P10451 314 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 CBR1P16152 277 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 NDUFB7P17568 137 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 CPT2P23786 658 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 HRH1P35367 487 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 CHRNA7P36544 502 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 SNU13P55769 128 aaKnown RBP12.95□□□□□ -0.34
COL25A1-201ENST00000399126 PPP1CBP62140 327 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 DAZAP2Q15038 168 aaPredicted RBP12.95□□□□□ -0.34
COL25A1-201ENST00000399126 C9orf152Q5JTZ5 239 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 TRAT1Q6PIZ9 186 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 ASCL4Q6XD76 172 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 C1orf162Q8NEQ5 155 aaPredicted RBP12.95□□□□□ -0.34
COL25A1-201ENST00000399126 STEAP2Q8NFT2 490 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 SLC25A40Q8TBP6 338 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 OR51J1Q9H342 316 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 IGHV3-64DA0A0J9YX35 117 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 C1QTNF9BB2RNN3 333 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 MSTNO14793 375 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 CD74P04233 296 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 NMBP08949 121 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 GSTP1P09211 210 aaKnown RBP12.95□□□□□ -0.34
COL25A1-201ENST00000399126 C1QTNF9P0C862 333 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 CXCL3P19876 107 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 ARFRP1Q13795 201 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 CEACAM21Q3KPI0 293 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 SCGB2B2Q4G0G5 96 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 CSNK2A3Q8NEV1 391 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 OR11H7Q8NGC8 314 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 OR52B4Q8NGK2 314 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 SLAMF9Q96A28 289 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 CHST6Q9GZX3 395 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 TREM2Q9NZC2 230 aa12.95□□□□□ -0.34
COL25A1-201ENST00000399126 COL6A6A6NMZ7 2263 aa12.94□□□□□ -0.34
COL25A1-201ENST00000399126 ROS1P08922 2347 aa12.94□□□□□ -0.34
COL25A1-201ENST00000399126 POLEQ07864 2286 aa12.94□□□□□ -0.34
COL25A1-201ENST00000399126 VSIG10L2P0DP72 767 aa12.94□□□□□ -0.34
COL25A1-201ENST00000399126 BMP5P22003 454 aa12.94□□□□□ -0.34
COL25A1-201ENST00000399126 TIMP3P35625 211 aa12.94□□□□□ -0.34
COL25A1-201ENST00000399126 UCP2P55851 309 aa12.94□□□□□ -0.34
COL25A1-201ENST00000399126 RBMS2Q15434 407 aaKnown RBP12.94□□□□□ -0.34
COL25A1-201ENST00000399126 HAGHLQ6PII5 290 aaPredicted RBP12.94□□□□□ -0.34
COL25A1-201ENST00000399126 BPIFB2Q8N4F0 458 aa12.94□□□□□ -0.34
COL25A1-201ENST00000399126 OR52M1Q8NGK5 317 aa12.94□□□□□ -0.34
COL25A1-201ENST00000399126 OR1J1Q8NGS3 322 aa12.94□□□□□ -0.34
COL25A1-201ENST00000399126 IL36RNQ9UBH0 155 aa12.94□□□□□ -0.34
COL25A1-201ENST00000399126 FZR1Q9UM11 496 aa12.94□□□□□ -0.34
COL25A1-201ENST00000399126 PMP2P02689 132 aa12.94□□□□□ -0.34
COL25A1-201ENST00000399126 RLN1P04808 185 aa12.94□□□□□ -0.34
COL25A1-201ENST00000399126 BCL3P20749 454 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms