RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 NKX2-6A6NCS4 301 aa11.29□□□□□ -0.6
PRAME-201ENST00000398741 PATE3B3GLJ2 98 aa11.29□□□□□ -0.6
PRAME-201ENST00000398741 TK1P04183 234 aa11.29□□□□□ -0.6
PRAME-201ENST00000398741 NKX2-1P43699 371 aaPredicted RBP11.29□□□□□ -0.6
PRAME-201ENST00000398741 CYB561P49447 251 aa11.29□□□□□ -0.6
PRAME-201ENST00000398741 UCP2P55851 309 aa11.29□□□□□ -0.6
PRAME-201ENST00000398741 Q0VFX4 171 aa11.29□□□□□ -0.6
PRAME-201ENST00000398741 ACER2Q5QJU3 275 aa11.29□□□□□ -0.6
PRAME-201ENST00000398741 WDR5BQ86VZ2 330 aa11.29□□□□□ -0.6
PRAME-201ENST00000398741 TMEM105Q8N8V8 129 aa11.29□□□□□ -0.6
PRAME-201ENST00000398741 SUMF1Q8NBK3 374 aa11.29□□□□□ -0.6
PRAME-201ENST00000398741 FAM213BQ8TBF2 198 aa11.29□□□□□ -0.6
PRAME-201ENST00000398741 HPSE2Q8WWQ2 592 aa11.29□□□□□ -0.6
PRAME-201ENST00000398741 POM121Q96HA1 1249 aa11.29□□□□□ -0.6
PRAME-201ENST00000398741 SLC7A10Q9NS82 523 aa11.29□□□□□ -0.6
PRAME-201ENST00000398741 RYDENQ9NUL5 291 aaKnown RBP11.29□□□□□ -0.6
PRAME-201ENST00000398741 COA4Q9NYJ1 87 aa11.29□□□□□ -0.6
PRAME-201ENST00000398741 FAM24AA6NFZ4 105 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 UMAD1C9J7I0 102 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 MRPL33O75394 65 aaKnown RBP11.28□□□□□ -0.6
PRAME-201ENST00000398741 CER1O95813 267 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 ASCL1P50553 236 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 ZNF266Q14584 549 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 CLINT1Q14677 625 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 TBC1D26Q86UD7 250 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 C1orf210Q8IVY1 113 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 KDF1Q8NAX2 398 aaPredicted RBP11.28□□□□□ -0.6
PRAME-201ENST00000398741 CPEB3Q8NE35 698 aaKnown RBP11.28□□□□□ -0.6
PRAME-201ENST00000398741 LFNGQ8NES3 379 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 OR56B2PQ8NGI1 322 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 CD300LFQ8TDQ1 290 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 HIST1H2BAQ96A08 127 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 SLAMF9Q96A28 289 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 C20orf24Q9BUV8 137 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 KCNJ16Q9NPI9 418 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 DEPPQ9NTK1 212 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 TCFL5Q9UL49 500 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 FBXO7Q9Y3I1 522 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 RTTNQ86VV8 2226 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 WDFY3Q8IZQ1 3526 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 CFAP54Q96N23 3096 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 A0A1B0GV50 99 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 MED19A0JLT2 244 aaPredicted RBP11.28□□□□□ -0.6
PRAME-201ENST00000398741 C7orf77A4D0Y5 90 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 FAM90A10PA6NDY2 464 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 FAM90A18PA6NE21 464 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 FAM90A16PA6NEW6 464 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 FAM90A20PA6NIJ5 464 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 FAM90A8PA6NJQ4 464 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 FAM90A7PA6NKC0 464 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 FAM90A22PA8MWA6 464 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 FAM90A12PA8MX19 464 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 FAM90A5PA8MXJ8 464 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 FAM90A23PA8MXZ1 464 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 M0R296 226 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 LAMTOR5O43504 91 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 F10P00742 488 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 FAM90A15PP0C7V4 464 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 FAM90A13PP0C7W8 464 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 FAM90A14PP0C7W9 464 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 FAM90A24PP0C7X0 464 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 BCL3P20749 454 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 GNRHRP30968 328 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 HAAOP46952 286 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 VAMP2P63027 116 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 PRDX4Q13162 271 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 HABP2Q14520 560 aaPredicted RBP11.28□□□□□ -0.6
PRAME-201ENST00000398741 SNIP1Q8TAD8 396 aaKnown RBP11.28□□□□□ -0.6
PRAME-201ENST00000398741 NEK7Q8TDX7 302 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 TMEM45BQ96B21 275 aa11.28□□□□□ -0.6
PRAME-201ENST00000398741 MT-ND4LP03901 98 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 S100A6P06703 90 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 MEOX2P50222 304 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 POLR2GP62487 172 aaKnown RBP eCLIP11.27□□□□□ -0.61
PRAME-201ENST00000398741 NRN1LQ496H8 165 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 KRBOX4Q5JUW0 171 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 DCAF12Q5T6F0 453 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 C9orf135Q5VTT2 229 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 EGLN1Q9GZT9 426 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 SLC25A31Q9H0C2 315 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 SLC35B3Q9H1N7 401 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 MRPS18CQ9Y3D5 142 aaKnown RBP11.27□□□□□ -0.61
PRAME-201ENST00000398741 ARID1AO14497 2285 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 SSSCA1O60232 199 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 GPM6AP51674 278 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 GFRA1P56159 465 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 SNRPEP62304 92 aaKnown RBP11.27□□□□□ -0.61
PRAME-201ENST00000398741 ARF1P84077 181 aaKnown RBP11.27□□□□□ -0.61
PRAME-201ENST00000398741 RNF212Q495C1 297 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 MRPL21Q7Z2W9 205 aaKnown RBP11.27□□□□□ -0.61
PRAME-201ENST00000398741 OR2G3Q8NGZ4 309 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 TMEM56Q96MV1 263 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 SCRT1Q9BWW7 348 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 PLEKHF2Q9H8W4 249 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 Q9N2K0 584 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 ATPIF1Q9UII2 106 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 BOKQ9UMX3 212 aaPredicted RBP11.27□□□□□ -0.61
PRAME-201ENST00000398741 TMEM56-RWDD3S4R434 201 aa11.27□□□□□ -0.61
PRAME-201ENST00000398741 KIAA1549Q9HCM3 1950 aa11.26□□□□□ -0.61
PRAME-201ENST00000398741 A0A096LPE4 126 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms