RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 HRASP01112 189 aa13.11□□□□□ -0.31
CYLD-202ENST00000398568 SOX8P57073 446 aa13.11□□□□□ -0.31
CYLD-202ENST00000398568 AGBL4Q5VU57 503 aa13.11□□□□□ -0.31
CYLD-202ENST00000398568 CISD2Q8N5K1 135 aaKnown RBP13.11□□□□□ -0.31
CYLD-202ENST00000398568 FAM160A2Q8N612 972 aaPredicted RBP13.11□□□□□ -0.31
CYLD-202ENST00000398568 TMEM252Q8N6L7 170 aa13.11□□□□□ -0.31
CYLD-202ENST00000398568 VSTM2LQ96N03 204 aa13.11□□□□□ -0.31
CYLD-202ENST00000398568 OR2A5Q96R48 311 aa13.11□□□□□ -0.31
CYLD-202ENST00000398568 P2RX4Q99571 388 aa13.11□□□□□ -0.31
CYLD-202ENST00000398568 TXNIPQ9H3M7 391 aa13.11□□□□□ -0.31
CYLD-202ENST00000398568 MSTNO14793 375 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 PHF1O43189 567 aaPredicted RBP13.1□□□□□ -0.31
CYLD-202ENST00000398568 DDAH2O95865 285 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 IFNA5P01569 189 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 IFI6P09912 130 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 CBLN3Q6UW01 205 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 HOXB13Q92826 284 aaPredicted RBP13.1□□□□□ -0.31
CYLD-202ENST00000398568 PHPT1Q9NRX4 125 aaPredicted RBP13.1□□□□□ -0.31
CYLD-202ENST00000398568 NXT1Q9UKK6 140 aaKnown RBP13.1□□□□□ -0.31
CYLD-202ENST00000398568 SSSCA1O60232 199 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 TMEM41BQ5BJD5 291 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 OR10S1Q8NGN2 331 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 OR51E1Q8TCB6 317 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 GSX1Q9H4S2 264 aaPredicted RBP13.1□□□□□ -0.31
CYLD-202ENST00000398568 TUBG2Q9NRH3 451 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 OR6C3Q9NZP0 311 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 OBSL1O75147 1896 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 TRAV36DV7A0A075B6V5 113 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 GPR89AB7ZAQ6 455 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 NUDT14O95848 222 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 GPR89BP0CG08 455 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 KCNIP4Q6PIL6 250 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 TM4SF19Q96DZ7 209 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 C18orf12Q96KH6 178 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 VPS25Q9BRG1 176 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 TIMM29Q9BSF4 260 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 DEC1Q9P2X7 70 aa13.1□□□□□ -0.31
CYLD-202ENST00000398568 TRAV1-1A0A0B4J248 108 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 ZNF519Q8TB69 540 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 TMEM171Q8WVE6 324 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 ALKBH7Q9BT30 221 aaPredicted RBP13.09□□□□□ -0.31
CYLD-202ENST00000398568 TMEM9BQ9NQ34 198 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 FREM3P0C091 2139 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 LRRK1Q38SD2 2015 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 POU2F2P09086 479 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 TDGF1P13385 188 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 CEACAM8P31997 349 aaPredicted RBP13.09□□□□□ -0.31
CYLD-202ENST00000398568 UCP3P55916 312 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 TAS2R30P59541 319 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 CD226Q15762 336 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 OR5D18Q8NGL1 313 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 CCDC74BQ96LY2 380 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 SPIN2AQ99865 258 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 SPIN2BQ9BPZ2 258 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 PLEKHJ1Q9NW61 149 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 HEBP2Q9Y5Z4 205 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 CCL25O15444 150 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 RRP8O43159 456 aaKnown RBP13.09□□□□□ -0.31
CYLD-202ENST00000398568 TRAPPC6AO75865 159 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 MTCP1P56278 107 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 SGCBQ16585 318 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 ABHD12BQ7Z5M8 362 aaPredicted RBP13.09□□□□□ -0.31
CYLD-202ENST00000398568 LRTM2Q8N967 370 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 AGBL5Q8NDL9 886 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 IMMP2LQ96T52 175 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 MAGT1Q9H0U3 335 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 RBKSQ9H477 322 aa13.09□□□□□ -0.31
CYLD-202ENST00000398568 PRRT4C9JH25 899 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 HRKO00198 91 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 GPR3P46089 330 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 FIGLAQ6QHK4 219 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 CA13Q8N1Q1 262 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 CMTM2Q8TAZ6 248 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 ORAOV1Q8WV07 137 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 FAM71F1Q96KD3 344 aaPredicted RBP13.08□□□□□ -0.32
CYLD-202ENST00000398568 C1orf147Q96MC9 270 aaPredicted RBP13.08□□□□□ -0.32
CYLD-202ENST00000398568 TMEM106BQ9NUM4 274 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 FAM206AQ9NX38 181 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 CACNA1HO95180 2353 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 CACNA1IQ9P0X4 2223 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 SPEGQ15772 3267 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 IGKV1D-8A0A087WSZ0 117 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 OR5G3P0C626 314 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 TPPP2P59282 170 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 ELAVL3Q14576 367 aaKnown RBP13.08□□□□□ -0.32
CYLD-202ENST00000398568 TCEA2Q15560 299 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 KCNMB1Q16558 191 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 CCDC71LQ8N9Z2 235 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 SLC38A9Q8NBW4 561 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 NECAP2Q9NVZ3 263 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 PILRAQ9UKJ1 303 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 TRAPPC1Q9Y5R8 145 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 EDDM13A0A1B0GTR0 161 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 TNFSF12O43508 249 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 DCAF7P61962 342 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 SP5Q6BEB4 398 aaPredicted RBP13.08□□□□□ -0.32
CYLD-202ENST00000398568 Q6ZS52 159 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 OR5AS1Q8N127 324 aa13.08□□□□□ -0.32
CYLD-202ENST00000398568 TMEM256Q8N2U0 113 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms