RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 IDH3GP51553 393 aaPredicted RBP4.39□□□□□ -1.71
SSR1-202ENST00000397511 SUCLG1P53597 346 aaKnown RBP4.39□□□□□ -1.71
SSR1-202ENST00000397511 CLDN6P56747 220 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 SOX8P57073 446 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 LEMD1Q68G75 181 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 TEX38Q6PEX7 206 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 C1QL2Q7Z5L3 287 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 ANKRD37Q7Z713 158 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 ZNF429Q86V71 674 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 UEVLDQ8IX04 471 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 MRPL41Q8IXM3 137 aaKnown RBP4.39□□□□□ -1.71
SSR1-202ENST00000397511 D2HGDHQ8N465 521 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 POC1AQ8NBT0 407 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 SLC24A4Q8NFF2 622 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 OR5D14Q8NGL3 314 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 IFI44Q8TCB0 444 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 RNASE8Q8TDE3 154 aaKnown RBP4.39□□□□□ -1.71
SSR1-202ENST00000397511 PIGTQ969N2 578 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 TMEM18Q96B42 140 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 ARHGAP5-AS1Q96IT6 56 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 RBM24Q9BX46 236 aaKnown RBP4.39□□□□□ -1.71
SSR1-202ENST00000397511 SMIM3Q9BZL3 60 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 SLC26A1Q9H2B4 701 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 DNAJC4Q9NNZ3 241 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 CHST11Q9NPF2 352 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 ZNF701Q9NV72 531 aaPredicted RBP4.39□□□□□ -1.71
SSR1-202ENST00000397511 B3GAT1Q9P2W7 334 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 VAX2Q9UIW0 290 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 LHFPL6Q9Y693 200 aa4.39□□□□□ -1.71
SSR1-202ENST00000397511 KIR2DL5BA0A0G2JN68 375 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 KIR2DL5BA0A0G2JPC4 375 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 C20orf202A1L168 122 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 DHRS7CA6NNS2 312 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 B9A039 149 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 SFT2D2O95562 160 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 IGLV3-19P01714 112 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 SRFP11831 508 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 DAP3P51398 398 aaKnown RBP4.38□□□□□ -1.71
SSR1-202ENST00000397511 CLDN17P56750 224 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 TMEM33P57088 247 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 CARD18P57730 90 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 KCNMB1Q16558 191 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 ZNF260Q3ZCT1 412 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 PLAC9Q5JTB6 97 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 TIPARPQ7Z3E1 657 aaKnown RBP4.38□□□□□ -1.71
SSR1-202ENST00000397511 DTX1Q86Y01 620 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 KIR2DL5AQ8N109 375 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 AGBL5Q8NDL9 886 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 OR8B12Q8NGG6 310 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 ZNF837Q96EG3 531 aaPredicted RBP4.38□□□□□ -1.71
SSR1-202ENST00000397511 PCED1AQ9H1Q7 454 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 FAM206AQ9NX38 181 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 OCIAD1Q9NX40 245 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 ZFP30Q9Y2G7 519 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 ATMQ13315 3056 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 CEP192Q8TEP8 1941 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 A0A0A6YYD4 124 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 A0A1B0GV50 99 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 A0A1W2PQD3 144 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 A0A1W2PQM1 296 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 XKRY2A2RUG3 117 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 RBFOX3A6NFN3 312 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 LIPT2A6NK58 231 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 PPP5D1E7EU14 171 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 HSD17B6O14756 317 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 SRSF10O75494 262 aaKnown RBP4.38□□□□□ -1.71
SSR1-202ENST00000397511 RAD51DO75771 328 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 SCGB1D1O95968 90 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 IGHV3-9P01782 118 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 IFI6P09912 130 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 FAHP16930 419 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 BRS3P32247 399 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 RAP1BP61224 184 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 COL5A1-AS1Q5SY13 56 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 AADACL3Q5VUY0 350 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 DNM1P34Q6PK57 102 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 BTNL3Q6UXE8 466 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 SLC25A26Q70HW3 274 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 SLC35E3Q7Z769 313 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 C20orf196Q8IYI0 205 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 OR2AE1Q8NHA4 323 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 RNF133Q8WVZ7 376 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 WFIKKN1Q96NZ8 548 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 SCGB3A2Q96PL1 93 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 RARRES2Q99969 163 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 HDHD3Q9BSH5 251 aaPredicted RBP4.38□□□□□ -1.71
SSR1-202ENST00000397511 DEFB126Q9BYW3 111 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 ZNF581Q9P0T4 197 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 LRFN1Q9P244 771 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 FOXD3Q9UJU5 478 aaPredicted RBP4.38□□□□□ -1.71
SSR1-202ENST00000397511 RAB22AQ9UL26 194 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 MRPS28Q9Y2Q9 187 aaKnown RBP4.38□□□□□ -1.71
SSR1-202ENST00000397511 RHBDD3Q9Y3P4 386 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 A0A1W2PN81 502 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 MED19A0JLT2 244 aaPredicted RBP4.38□□□□□ -1.71
SSR1-202ENST00000397511 ANKUB1A6NFN9 424 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 HSBP1L1C9JCN9 74 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 H0YL77 283 aa4.38□□□□□ -1.71
SSR1-202ENST00000397511 CLDN34H7C241 214 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms