RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 RAB12Q6IQ22 244 aa19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 BRICD5Q6PL45 260 aa19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 C17orf107Q6ZR85 190 aa19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 CMTM4Q8IZR5 234 aa19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 SUMF2Q8NBJ7 301 aa19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 PPP1R35Q8TAP8 253 aa19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 DPCDQ9BVM2 203 aaPredicted RBP19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 NXF2Q9GZY0 626 aaKnown RBP19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 PPA2Q9H2U2 334 aa19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 SLC25A10Q9UBX3 287 aaPredicted RBP19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 PEX16Q9Y5Y5 336 aa19.62■□□□□ 0.73
TSPAN4-203ENST00000397397 K7N7A8 449 aa19.61■□□□□ 0.73
TSPAN4-203ENST00000397397 RGS5O15539 181 aa19.61■□□□□ 0.73
TSPAN4-203ENST00000397397 TK1P04183 234 aa19.61■□□□□ 0.73
TSPAN4-203ENST00000397397 MOGAT2Q3SYC2 334 aa19.61■□□□□ 0.73
TSPAN4-203ENST00000397397 ESCO2Q56NI9 601 aa19.61■□□□□ 0.73
TSPAN4-203ENST00000397397 ZNF841Q6ZN19 808 aa19.61■□□□□ 0.73
TSPAN4-203ENST00000397397 FGFRL1Q8N441 504 aa19.61■□□□□ 0.73
TSPAN4-203ENST00000397397 BPIFB2Q8N4F0 458 aa19.61■□□□□ 0.73
TSPAN4-203ENST00000397397 OR4S1Q8NGB4 309 aa19.61■□□□□ 0.73
TSPAN4-203ENST00000397397 OR10R2Q8NGX6 335 aa19.61■□□□□ 0.73
TSPAN4-203ENST00000397397 ST8SIA4Q92187 359 aa19.61■□□□□ 0.73
TSPAN4-203ENST00000397397 PHF21AQ96BD5 680 aa19.61■□□□□ 0.73
TSPAN4-203ENST00000397397 CMTM3Q96MX0 182 aa19.61■□□□□ 0.73
TSPAN4-203ENST00000397397 FAM234AQ9H0X4 552 aa19.61■□□□□ 0.73
TSPAN4-203ENST00000397397 ABCG5Q9H222 651 aa19.61■□□□□ 0.73
TSPAN4-203ENST00000397397 RCC2Q9P258 522 aaKnown RBP19.61■□□□□ 0.73
TSPAN4-203ENST00000397397 CLN8Q9UBY8 286 aa19.61■□□□□ 0.73
TSPAN4-203ENST00000397397 CTDSP2O14595 271 aa19.6■□□□□ 0.73
TSPAN4-203ENST00000397397 FCN3O75636 299 aa19.6■□□□□ 0.73
TSPAN4-203ENST00000397397 EIF4EP06730 217 aaKnown RBP19.6■□□□□ 0.73
TSPAN4-203ENST00000397397 NDUFB7P17568 137 aa19.6■□□□□ 0.73
TSPAN4-203ENST00000397397 CHATP28329 748 aa19.6■□□□□ 0.73
TSPAN4-203ENST00000397397 OR3A1P47881 315 aa19.6■□□□□ 0.73
TSPAN4-203ENST00000397397 GNB2P62879 340 aa19.6■□□□□ 0.73
TSPAN4-203ENST00000397397 GRK1Q15835 563 aa19.6■□□□□ 0.73
TSPAN4-203ENST00000397397 WDR25Q64LD2 544 aaPredicted RBP19.6■□□□□ 0.73
TSPAN4-203ENST00000397397 OR8H2Q8N162 312 aa19.6■□□□□ 0.73
TSPAN4-203ENST00000397397 MAPK1IP1LQ8NDC0 245 aa19.6■□□□□ 0.73
TSPAN4-203ENST00000397397 RAB40AQ8WXH6 277 aa19.6■□□□□ 0.73
TSPAN4-203ENST00000397397 SHARPINQ9H0F6 387 aa19.6■□□□□ 0.73
TSPAN4-203ENST00000397397 VPS13CQ709C8 3753 aa19.6■□□□□ 0.73
TSPAN4-203ENST00000397397 FOXI3A8MTJ6 420 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 FAM25AB3EWG3 89 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 FAM25CB3EWG5 89 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 FAM25GB3EWG6 89 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 MCRIP1C9JLW8 97 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 RAB27BO00194 218 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 SCGNO76038 276 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 APOA1P02647 267 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 NPY4RP50391 375 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 Q6ZTK2 550 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 C6orf201Q7Z4U5 140 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 OR5D13Q8NGL4 314 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 NEK7Q8TDX7 302 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 S100A16Q96FQ6 103 aaKnown RBP19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 SSBP3Q9BWW4 388 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 MMP27Q9H306 513 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 DIABLOQ9NR28 239 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 PLEKHJ1Q9NW61 149 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 CELSR1Q9NYQ6 3014 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 PHF1O43189 567 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 ELK1P19419 428 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 TMEM50BP56557 158 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 ATXN7L3Q14CW9 347 aaPredicted RBP19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 RTN4RL2Q86UN3 420 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 RAB3CQ96E17 227 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 ARHGAP5-AS1Q96IT6 56 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 MIXL1Q9H2W2 232 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 A3GALT2U3KPV4 340 aa19.59■□□□□ 0.73
TSPAN4-203ENST00000397397 UBE2QL1A1L167 161 aa19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 FAM157AC9JC47 383 aa19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 H7C1Q1 480 aa19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 MGST3O14880 152 aa19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 GLAP06280 429 aa19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 RBM39Q14498 530 aaKnown RBP19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 EDDM3AQ14507 147 aa19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 PLAC9Q5JTB6 97 aa19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 GDPD3Q7L5L3 318 aa19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 LAX1Q8IWV1 398 aa19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 DTX3Q8N9I9 347 aa19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 H1FXQ92522 213 aaKnown RBP19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 CYYR1Q96J86 154 aa19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 SULT4A1Q9BR01 284 aa19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 FAAP24Q9BTP7 215 aa19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 PECRQ9BY49 303 aa19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 ING3Q9NXR8 418 aa19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 ADAM30Q9UKF2 790 aa19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 HSF4Q9ULV5 492 aa19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 CR1P17927 2039 aa19.58■□□□□ 0.72
TSPAN4-203ENST00000397397 DOCK11Q5JSL3 2073 aa19.57■□□□□ 0.72
TSPAN4-203ENST00000397397 CDK2P24941 298 aa19.57■□□□□ 0.72
TSPAN4-203ENST00000397397 KCNJ3P48549 501 aa19.57■□□□□ 0.72
TSPAN4-203ENST00000397397 A0A0A6YYH2 397 aa19.56■□□□□ 0.72
TSPAN4-203ENST00000397397 A6NJ64 397 aa19.56■□□□□ 0.72
TSPAN4-203ENST00000397397 GPR37O15354 613 aa19.56■□□□□ 0.72
TSPAN4-203ENST00000397397 CSN2P05814 226 aa19.56■□□□□ 0.72
TSPAN4-203ENST00000397397 GNB3P16520 340 aa19.56■□□□□ 0.72
TSPAN4-203ENST00000397397 EDDM3BP56851 147 aa19.56■□□□□ 0.72
TSPAN4-203ENST00000397397 AESQ08117 197 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms