RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 RUNX1Q01196 453 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 PPP1R8Q12972 351 aaKnown RBP10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 GPR50Q13585 617 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 PTGES3Q15185 160 aaKnown RBP10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 CXorf66Q5JRM2 361 aaPredicted RBP10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 SLX4IPQ5VYV7 408 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 ZNF773Q6PK81 442 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 SLC35E3Q7Z769 313 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 RTN4RL2Q86UN3 420 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 ABHD12Q8N2K0 398 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 OR5A2Q8NGI9 324 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 OR8J1Q8NGP2 316 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 RHOXF1Q8NHV9 184 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 NIPSNAP1Q9BPW8 284 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 IL20Q9NYY1 176 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 KIAA1456Q9P272 454 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 CDH10Q9Y6N8 788 aa10.59□□□□□ -0.71
VCPKMT-201ENST00000395859 OR5B21A6NL26 309 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 OOSP1A8MZH6 123 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 BUB1B-PAK6H3BSN5 160 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 ZNF701M0R085 212 aaPredicted RBP10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 ZNF593O00488 134 aaPredicted RBP10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 SLC25A17O43808 307 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 IFNA6P05013 189 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 HMGN1P05114 100 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 SPARCP09486 303 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 FAM106CPP0CH98 169 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 SNRPBP14678 240 aaKnown RBP10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 OPRL1P41146 370 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 GTF2A1P52655 376 aaPredicted RBP10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 EDDM3BP56851 147 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 CEP78Q5JTW2 689 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 FOXRED2Q8IWF2 684 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 OR8H2Q8N162 312 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 OR9Q2Q8NGE9 314 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 OR51L1Q8NGJ5 315 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 OR2T4Q8NH00 348 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 TEX47Q8TBZ9 253 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 ZNF596Q8TC21 504 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 NABP2Q9BQ15 211 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 DUSP21Q9H596 190 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 CNOT2Q9NZN8 540 aaKnown RBP10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 DNAJC27Q9NZQ0 273 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 SLC22A13Q9Y226 551 aa10.58□□□□□ -0.72
VCPKMT-201ENST00000395859 hADV38S2A0JD32 116 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 TMEM82A0PJX8 343 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 AP4M1O00189 453 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 MITFO75030 526 aaPredicted RBP10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 IGHG4P01861 327 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 APOC1P02654 83 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 OR8U8P0C7N1 319 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 PSMB8P28062 276 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 CDK5Q00535 292 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 TMED1Q13445 227 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 SRSF7Q16629 238 aaKnown RBP eCLIP10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 HLA-DRB5Q30154 266 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 SLC35F1Q5T1Q4 408 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 C12orf73Q69YU5 71 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 SVOPQ8N4V2 548 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 ZNF511Q8NB15 262 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 PROKR2Q8NFJ6 384 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 DCUN1D4Q92564 292 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 FCGR1BQ92637 280 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 ST6GALNAC6Q969X2 333 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 AMELYQ99218 206 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 ZNF286AQ9HBT8 521 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 CLN6Q9NWW5 311 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 OR14J1Q9UGF5 321 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 SNX5Q9Y5X3 404 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 KIAA2026Q5HYC2 2103 aa10.57□□□□□ -0.72
VCPKMT-201ENST00000395859 EFCAB10A6NFE3 127 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 H3BN98 237 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 J3QT63 122 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 NXPH2O95156 264 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 SMIM18P0DKX4 95 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 MPZP25189 248 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 HSD11B1P28845 292 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 GDNFP39905 211 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 GPR12P47775 334 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 ALDH3B2P48448 385 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 BLVRAP53004 296 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 UTF1Q5T230 341 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 RNLSQ5VYX0 342 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 GDPD3Q7L5L3 318 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 PRSS48Q7RTY5 328 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 ENTHD1Q8IYW4 607 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 TPRX1Q8N7U7 411 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 ASCC1Q8N9N2 400 aaKnown RBP10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 FAM81AQ8TBF8 368 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 PGAM5Q96HS1 289 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 HIST1H2AAQ96QV6 131 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 ABHD6Q9BV23 337 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 KRTAP4-5Q9BYR2 181 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 NMNAT2Q9BZQ4 307 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 EGLN3Q9H6Z9 239 aa10.56□□□□□ -0.72
VCPKMT-201ENST00000395859 A0A087X0M5 115 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 A0A1B0GX30 115 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 OVOL1O14753 267 aa10.55□□□□□ -0.72
VCPKMT-201ENST00000395859 SAP30O75446 220 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms