RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 LSM6P62312 80 aaKnown RBP6.62□□□□□ -1.35
SYNE2-205ENST00000394768 MRPS11P82912 194 aaKnown RBP6.62□□□□□ -1.35
SYNE2-205ENST00000394768 ABLIM2Q6H8Q1 611 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 C11orf87Q6NUJ2 197 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 OR4C12Q96R67 309 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 IGHV3-15A0A0B4J1V0 119 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 BSGP35613 385 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 LRRC75BQ2VPJ9 315 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 OR4P4Q8NGL7 312 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 OR1L8Q8NGR8 309 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 MAGT1Q9H0U3 335 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 MBNL1Q9NR56 388 aaKnown RBP6.62□□□□□ -1.35
SYNE2-205ENST00000394768 CHST2Q9Y4C5 530 aa6.62□□□□□ -1.35
SYNE2-205ENST00000394768 DHRS7CA6NNS2 312 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 SPEM2Q0P670 501 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 JOSD1Q15040 202 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-205ENST00000394768 OR52B4Q8NGK2 314 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 OR6X1Q8NH79 312 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 FOXQ1Q9C009 403 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 ZNF107Q9UII5 783 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-205ENST00000394768 MGPP08493 103 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 LPAR6P43657 344 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 HMGA2P52926 109 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 PPP2CBP62714 309 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 CTF1Q16619 201 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 NUDCD2Q8WVJ2 157 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 JMJD8Q96S16 334 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 TP53RKQ96S44 253 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 Q9N2K0 584 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 ASCL3Q9NQ33 180 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 ALS2Q96Q42 1657 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 RECKO95980 971 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 PRR35P0CG20 571 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 HIST1H1DP16402 221 aaKnown RBP6.61□□□□□ -1.35
SYNE2-205ENST00000394768 HES3Q5TGS1 186 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 OR52M1Q8NGK5 317 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 LINC00052Q96N35 136 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 MS4A10Q96PG2 267 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 TMPRSS13Q9BYE2 586 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 ERRFI1Q9UJM3 462 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-205ENST00000394768 BCORQ6W2J9 1755 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 CD3DP04234 171 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 CD99P14209 185 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 NMUP48645 174 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 EVX1P49640 407 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 PLAURQ03405 335 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 FAM106AQ4KMX7 169 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 RBM45Q8IUH3 476 aaKnown RBP6.61□□□□□ -1.35
SYNE2-205ENST00000394768 NKAIN4Q8IVV8 208 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 OR10G4Q8NGN3 311 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 OR10G9Q8NGN4 311 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 OR10G7Q8NGN6 311 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 R3HDM4Q96D70 268 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 OR5M11Q96RB7 305 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 PNLIPP16233 465 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 FIZ1Q96SL8 496 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 WDR54Q9H977 334 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 FGF20Q9NP95 211 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-205ENST00000394768 DIDO1Q9BTC0 2240 aaKnown RBP6.61□□□□□ -1.35
SYNE2-205ENST00000394768 C2CD4DB7Z1M9 353 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 H0Y8X5 98 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 PF4P02776 101 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 EPHA8P29322 1005 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-205ENST00000394768 D2HGDHQ8N465 521 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 CRYGNQ8WXF5 182 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 HARBI1Q96MB7 349 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 TXNDC17Q9BRA2 123 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 A0A0A6YYD5 115 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 POM121BA6NF01 834 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 H3BVH4 76 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 CCSO14618 274 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 LMX1BO60663 402 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 GBGT1Q8N5D6 347 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 ZNF519Q8TB69 540 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 NTN4Q9HB63 628 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 FOXD3Q9UJU5 478 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-205ENST00000394768 GEMIN2O14893 280 aaKnown RBP6.61□□□□□ -1.35
SYNE2-205ENST00000394768 RER1O15258 196 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 HTN1P15515 57 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 MAS1LP35410 378 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 ACAA2P42765 397 aaKnown RBP6.61□□□□□ -1.35
SYNE2-205ENST00000394768 GPR61Q9BZJ8 451 aa6.61□□□□□ -1.35
SYNE2-205ENST00000394768 PLEKHB1Q9UF11 243 aaPredicted RBP6.61□□□□□ -1.35
SYNE2-205ENST00000394768 UPK1AO00322 258 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 ERVS71-1P61550 626 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 BPIFA4PQ86YQ2 179 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 PARP12Q9H0J9 701 aaKnown RBP6.6□□□□□ -1.35
SYNE2-205ENST00000394768 MMP25Q9NPA2 562 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 RAXQ9Y2V3 346 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 FGF5P12034 268 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 CEBPDP49716 269 aaPredicted RBP6.6□□□□□ -1.35
SYNE2-205ENST00000394768 ACVR1Q04771 509 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 P2RY6Q15077 328 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 DEFB124Q8NES8 71 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 ZIC5Q96T25 663 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 NACAE9PAV3 2078 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 C17orf51A8MQB3 221 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 GALNSP34059 522 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 JAG1P78504 1218 aa6.6□□□□□ -1.35
SYNE2-205ENST00000394768 WDR25Q64LD2 544 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms