RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 OR5B21A6NL26 309 aa17.26■□□□□ 0.35
PRKCD-202ENST00000394729 TNFSF12O43508 249 aa17.26■□□□□ 0.35
PRKCD-202ENST00000394729 NAT1P18440 290 aa17.26■□□□□ 0.35
PRKCD-202ENST00000394729 MECP2P51608 486 aaKnown RBP17.26■□□□□ 0.35
PRKCD-202ENST00000394729 ANKRD55Q3KP44 614 aa17.26■□□□□ 0.35
PRKCD-202ENST00000394729 ZNF718Q3SXZ3 478 aa17.26■□□□□ 0.35
PRKCD-202ENST00000394729 RGS7BPQ6MZT1 257 aaPredicted RBP17.26■□□□□ 0.35
PRKCD-202ENST00000394729 PHB2Q99623 299 aa17.26■□□□□ 0.35
PRKCD-202ENST00000394729 RGS11O94810 467 aa17.26■□□□□ 0.35
PRKCD-202ENST00000394729 CNOT4O95628 575 aaKnown RBP17.26■□□□□ 0.35
PRKCD-202ENST00000394729 PPP3CBP16298 524 aa17.26■□□□□ 0.35
PRKCD-202ENST00000394729 TIMP3P35625 211 aa17.26■□□□□ 0.35
PRKCD-202ENST00000394729 SUPT4H1P63272 117 aaKnown RBP17.26■□□□□ 0.35
PRKCD-202ENST00000394729 PAN3Q58A45 887 aaKnown RBP17.26■□□□□ 0.35
PRKCD-202ENST00000394729 SPIN3Q5JUX0 258 aa17.26■□□□□ 0.35
PRKCD-202ENST00000394729 CCDC36Q8IYA8 594 aa17.26■□□□□ 0.35
PRKCD-202ENST00000394729 SECTM1Q8WVN6 248 aa17.26■□□□□ 0.35
PRKCD-202ENST00000394729 OPA3Q9H6K4 179 aa17.26■□□□□ 0.35
PRKCD-202ENST00000394729 ZNF286AQ9HBT8 521 aa17.26■□□□□ 0.35
PRKCD-202ENST00000394729 PCDHB16Q9NRJ7 776 aa17.26■□□□□ 0.35
PRKCD-202ENST00000394729 HSF4Q9ULV5 492 aa17.26■□□□□ 0.35
PRKCD-202ENST00000394729 CXCL2P19875 107 aa17.25■□□□□ 0.35
PRKCD-202ENST00000394729 SEZ6L2Q6UXD5 910 aa17.25■□□□□ 0.35
PRKCD-202ENST00000394729 OR8G5Q8NG78 346 aa17.25■□□□□ 0.35
PRKCD-202ENST00000394729 MRPS24Q96EL2 167 aaKnown RBP17.25■□□□□ 0.35
PRKCD-202ENST00000394729 METTL8Q9H825 291 aaKnown RBP17.25■□□□□ 0.35
PRKCD-202ENST00000394729 NECAP2Q9NVZ3 263 aa17.25■□□□□ 0.35
PRKCD-202ENST00000394729 IL36GQ9NZH8 169 aa17.25■□□□□ 0.35
PRKCD-202ENST00000394729 ZNF107Q9UII5 783 aaPredicted RBP17.25■□□□□ 0.35
PRKCD-202ENST00000394729 OSGIN2Q9Y236 505 aa17.25■□□□□ 0.35
PRKCD-202ENST00000394729 H3BUI4 141 aa17.25■□□□□ 0.35
PRKCD-202ENST00000394729 J3QT63 122 aa17.25■□□□□ 0.35
PRKCD-202ENST00000394729 SERPINF1P36955 418 aa17.25■□□□□ 0.35
PRKCD-202ENST00000394729 IGHV3OR15-7A0A075B7D8 119 aa17.25■□□□□ 0.35
PRKCD-202ENST00000394729 OR2H2O95918 312 aa17.25■□□□□ 0.35
PRKCD-202ENST00000394729 AADACP22760 399 aa17.25■□□□□ 0.35
PRKCD-202ENST00000394729 PIGPP57054 158 aa17.25■□□□□ 0.35
PRKCD-202ENST00000394729 TMEM128Q5BJH2 165 aa17.25■□□□□ 0.35
PRKCD-202ENST00000394729 SPICQ8N5J4 248 aa17.25■□□□□ 0.35
PRKCD-202ENST00000394729 RELL2Q8NC24 303 aaPredicted RBP17.25■□□□□ 0.35
PRKCD-202ENST00000394729 C14orf166Q9Y224 244 aaKnown RBP17.25■□□□□ 0.35
PRKCD-202ENST00000394729 SLC33A1O00400 549 aaPredicted RBP17.24■□□□□ 0.35
PRKCD-202ENST00000394729 GIPP09681 153 aaPredicted RBP17.24■□□□□ 0.35
PRKCD-202ENST00000394729 TBPP20226 339 aa17.24■□□□□ 0.35
PRKCD-202ENST00000394729 ADAM5Q6NVV9 412 aa17.24■□□□□ 0.35
PRKCD-202ENST00000394729 ZDHHC22Q8N966 263 aa17.24■□□□□ 0.35
PRKCD-202ENST00000394729 C1orf162Q8NEQ5 155 aaPredicted RBP17.24■□□□□ 0.35
PRKCD-202ENST00000394729 SLX1AQ9BQ83 275 aa17.24■□□□□ 0.35
PRKCD-202ENST00000394729 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.24■□□□□ 0.35
PRKCD-202ENST00000394729 SSUH2Q9Y2M2 353 aa17.24■□□□□ 0.35
PRKCD-202ENST00000394729 IQCF6A8MYZ5 107 aa17.24■□□□□ 0.35
PRKCD-202ENST00000394729 ACTBL2Q562R1 376 aa17.24■□□□□ 0.35
PRKCD-202ENST00000394729 PPP1R1CQ8WVI7 109 aa17.24■□□□□ 0.35
PRKCD-202ENST00000394729 METRNQ9UJH8 293 aa17.24■□□□□ 0.35
PRKCD-202ENST00000394729 ANAPC10Q9UM13 185 aa17.24■□□□□ 0.35
PRKCD-202ENST00000394729 CFAP46Q8IYW2 2715 aa17.24■□□□□ 0.35
PRKCD-202ENST00000394729 MED13LQ71F56 2210 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 IGLV1-44P01699 117 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 CEACAM8P31997 349 aaPredicted RBP17.23■□□□□ 0.35
PRKCD-202ENST00000394729 HTR2BP41595 481 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 ARL6IP1Q15041 203 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 LTC4SQ16873 150 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 ABCA11PQ4W5N1 156 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 TIMM23BQ5SRD1 257 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 TGIF2LYQ8IUE0 185 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 SFXN3Q9BWM7 321 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 FBXO9Q9UK97 447 aaPredicted RBP17.23■□□□□ 0.35
PRKCD-202ENST00000394729 ZSCAN5BA6NJL1 495 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 FAM90A27PA6NNH2 459 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 TEX46H3BTG2 121 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 L7N2F9 121 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 CFDP00746 253 aaPredicted RBP17.23■□□□□ 0.35
PRKCD-202ENST00000394729 RAP2BP61225 183 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 IL24Q13007 206 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 MEX3BQ6ZN04 569 aaKnown RBP17.23■□□□□ 0.35
PRKCD-202ENST00000394729 LHFPL1Q86WI0 220 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 KIRREL1Q96J84 757 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 ARL6Q9H0F7 186 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 C1orf123Q9NWV4 160 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 NPTNQ9Y639 398 aa17.23■□□□□ 0.35
PRKCD-202ENST00000394729 ABCD4O14678 606 aa17.22■□□□□ 0.35
PRKCD-202ENST00000394729 PSPNO60542 156 aa17.22■□□□□ 0.35
PRKCD-202ENST00000394729 FPR2P25090 351 aa17.22■□□□□ 0.35
PRKCD-202ENST00000394729 HERPUD1Q15011 391 aa17.22■□□□□ 0.35
PRKCD-202ENST00000394729 PLPPR1Q8TBJ4 325 aa17.22■□□□□ 0.35
PRKCD-202ENST00000394729 BCL2L14Q9BZR8 327 aa17.22■□□□□ 0.35
PRKCD-202ENST00000394729 ALX4Q9H161 411 aaPredicted RBP17.22■□□□□ 0.35
PRKCD-202ENST00000394729 LRP5LA4QPB2 252 aa17.22■□□□□ 0.35
PRKCD-202ENST00000394729 MPC2O95563 127 aa17.22■□□□□ 0.35
PRKCD-202ENST00000394729 IGHV3-13P01766 116 aa17.22■□□□□ 0.35
PRKCD-202ENST00000394729 IGHV3-7P01780 117 aa17.22■□□□□ 0.35
PRKCD-202ENST00000394729 ZNF728P0DKX0 622 aa17.22■□□□□ 0.35
PRKCD-202ENST00000394729 MITD1Q8WV92 249 aa17.22■□□□□ 0.35
PRKCD-202ENST00000394729 RFPL4AA6NLU0 287 aa17.21■□□□□ 0.35
PRKCD-202ENST00000394729 RFPL4AL1F8VTS6 287 aa17.21■□□□□ 0.35
PRKCD-202ENST00000394729 HSD17B6O14756 317 aa17.21■□□□□ 0.35
PRKCD-202ENST00000394729 OR2A4O95047 310 aa17.21■□□□□ 0.35
PRKCD-202ENST00000394729 SLC34A2O95436 690 aa17.21■□□□□ 0.35
PRKCD-202ENST00000394729 GRNP28799 593 aaKnown RBP17.21■□□□□ 0.35
PRKCD-202ENST00000394729 EDDM3AQ14507 147 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms