RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 ZNF92Q03936 586 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 KIR2DS1Q14954 304 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 OR10D4PQ8NGN7 298 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 MRGPRFQ96AM1 343 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 BARX1Q9HBU1 254 aaPredicted RBP14.04□□□□□ -0.16
PCDH1-203ENST00000394536 CCL28Q9NRJ3 127 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 GAB2Q9UQC2 676 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 FAM3AP98173 230 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 PHYHD1Q5SRE7 291 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 TMEM164Q5U3C3 297 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 CCDC54Q8NEL0 328 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 PCDH15Q96QU1 1955 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 A0A087WZY1 265 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 A0A1W2PNV4 684 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 CRYM-AS1A6NIL9 109 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 SIRPB1O00241 398 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 SEC11BP0C7V7 166 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 P2RY1P47900 373 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 IL13RA2Q14627 380 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 LILRB1Q8NHL6 650 aaPredicted RBP14.04□□□□□ -0.16
PCDH1-203ENST00000394536 RPUSD4Q96CM3 377 aaKnown RBP14.04□□□□□ -0.16
PCDH1-203ENST00000394536 GNPNAT1Q96EK6 184 aaPredicted RBP14.04□□□□□ -0.16
PCDH1-203ENST00000394536 SPSB2Q99619 263 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 ZNF581Q9P0T4 197 aa14.04□□□□□ -0.16
PCDH1-203ENST00000394536 A0A1W2PQM1 296 aa14.03□□□□□ -0.16
PCDH1-203ENST00000394536 FBP1P09467 338 aa14.03□□□□□ -0.16
PCDH1-203ENST00000394536 HOXC12P31275 282 aa14.03□□□□□ -0.16
PCDH1-203ENST00000394536 EIF2S3P41091 472 aaKnown RBP14.03□□□□□ -0.16
PCDH1-203ENST00000394536 ARF1P84077 181 aaKnown RBP14.03□□□□□ -0.16
PCDH1-203ENST00000394536 IZUMO4Q1ZYL8 232 aa14.03□□□□□ -0.16
PCDH1-203ENST00000394536 WBP1Q96G27 269 aa14.03□□□□□ -0.16
PCDH1-203ENST00000394536 TRBV23-1A0A0A0MS06 115 aa14.03□□□□□ -0.16
PCDH1-203ENST00000394536 A0A0U1RQV5 110 aa14.03□□□□□ -0.16
PCDH1-203ENST00000394536 ZNF587BE7ETH6 402 aa14.03□□□□□ -0.16
PCDH1-203ENST00000394536 GRPP07492 148 aa14.03□□□□□ -0.16
PCDH1-203ENST00000394536 METTL15P1P0C7V9 234 aa14.03□□□□□ -0.16
PCDH1-203ENST00000394536 QRFPP83859 136 aa14.03□□□□□ -0.16
PCDH1-203ENST00000394536 TRIM61Q5EBN2 209 aa14.03□□□□□ -0.16
PCDH1-203ENST00000394536 FRZBQ92765 325 aa14.03□□□□□ -0.16
PCDH1-203ENST00000394536 HINT2Q9BX68 163 aa14.03□□□□□ -0.16
PCDH1-203ENST00000394536 TERTO14746 1132 aaKnown RBP14.03□□□□□ -0.16
PCDH1-203ENST00000394536 MDKP21741 143 aaPredicted RBP14.03□□□□□ -0.16
PCDH1-203ENST00000394536 CARFQ8N187 725 aa14.03□□□□□ -0.16
PCDH1-203ENST00000394536 ZNF808Q8N4W9 903 aaPredicted RBP14.03□□□□□ -0.16
PCDH1-203ENST00000394536 COMMD1Q8N668 190 aa14.03□□□□□ -0.16
PCDH1-203ENST00000394536 INTS12Q96CB8 462 aaKnown RBP14.03□□□□□ -0.16
PCDH1-203ENST00000394536 KCNIP1Q9NZI2 227 aa14.03□□□□□ -0.16
PCDH1-203ENST00000394536 AP4M1O00189 453 aa14.02□□□□□ -0.16
PCDH1-203ENST00000394536 DEGS1O15121 323 aa14.02□□□□□ -0.16
PCDH1-203ENST00000394536 FAM157CP0CG43 387 aa14.02□□□□□ -0.16
PCDH1-203ENST00000394536 FOSL2P15408 326 aa14.02□□□□□ -0.16
PCDH1-203ENST00000394536 IL2RGP31785 369 aa14.02□□□□□ -0.16
PCDH1-203ENST00000394536 NPBWR2P48146 333 aa14.02□□□□□ -0.16
PCDH1-203ENST00000394536 MPV17LQ2QL34 196 aa14.02□□□□□ -0.16
PCDH1-203ENST00000394536 OR2T2Q6IF00 324 aa14.02□□□□□ -0.16
PCDH1-203ENST00000394536 ZNF574Q6ZN55 896 aaPredicted RBP14.02□□□□□ -0.16
PCDH1-203ENST00000394536 ZNF441Q8N8Z8 693 aa14.02□□□□□ -0.16
PCDH1-203ENST00000394536 OR2V1Q8NHB1 315 aa14.02□□□□□ -0.16
PCDH1-203ENST00000394536 LYZL4Q96KX0 146 aa14.02□□□□□ -0.16
PCDH1-203ENST00000394536 Q96M66 194 aa14.02□□□□□ -0.16
PCDH1-203ENST00000394536 LAMTOR5O43504 91 aa14.02□□□□□ -0.17
PCDH1-203ENST00000394536 SRSF10O75494 262 aaKnown RBP14.02□□□□□ -0.17
PCDH1-203ENST00000394536 GAPDHP04406 335 aaKnown RBP14.02□□□□□ -0.17
PCDH1-203ENST00000394536 RAC3P60763 192 aa14.02□□□□□ -0.17
PCDH1-203ENST00000394536 RAB1AP62820 205 aa14.02□□□□□ -0.17
PCDH1-203ENST00000394536 UBAC2Q8NBM4 344 aa14.02□□□□□ -0.17
PCDH1-203ENST00000394536 THOC3Q96J01 351 aaKnown RBP14.02□□□□□ -0.17
PCDH1-203ENST00000394536 SMIM8Q96KF7 97 aa14.02□□□□□ -0.17
PCDH1-203ENST00000394536 ZNF488Q96MN9 340 aa14.02□□□□□ -0.17
PCDH1-203ENST00000394536 GAR1Q9NY12 217 aaKnown RBP14.02□□□□□ -0.17
PCDH1-203ENST00000394536 POMT1Q9Y6A1 747 aa14.02□□□□□ -0.17
PCDH1-203ENST00000394536 NCOA6Q14686 2063 aaPredicted RBP14.02□□□□□ -0.17
PCDH1-203ENST00000394536 E9PLN8 166 aa14.02□□□□□ -0.17
PCDH1-203ENST00000394536 H3BQ15 152 aa14.02□□□□□ -0.17
PCDH1-203ENST00000394536 SCAF4O95104 1147 aaKnown RBP14.02□□□□□ -0.17
PCDH1-203ENST00000394536 LY86O95711 162 aa14.02□□□□□ -0.17
PCDH1-203ENST00000394536 PSG4Q00888 419 aa14.02□□□□□ -0.17
PCDH1-203ENST00000394536 ENDOGQ14249 297 aaKnown RBP14.02□□□□□ -0.17
PCDH1-203ENST00000394536 ZNF787Q6DD87 383 aa14.02□□□□□ -0.17
PCDH1-203ENST00000394536 CACFD1Q9UGQ2 172 aa14.02□□□□□ -0.17
PCDH1-203ENST00000394536 BOKQ9UMX3 212 aaPredicted RBP14.02□□□□□ -0.17
PCDH1-203ENST00000394536 STARD10Q9Y365 291 aa14.02□□□□□ -0.17
PCDH1-203ENST00000394536 RFNGQ9Y644 331 aa14.02□□□□□ -0.17
PCDH1-203ENST00000394536 KIAA1549LQ6ZVL6 1849 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 DFFBO76075 338 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 LIFP15018 202 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 EPHA8P29322 1005 aaPredicted RBP14.01□□□□□ -0.17
PCDH1-203ENST00000394536 LHX4Q969G2 390 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 CABLES2Q9BTV7 478 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 PRUNE2Q8WUY3 3088 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 C9JQL5 133 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 NXPH2O95156 264 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 SCTP09683 121 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 RAC2P15153 192 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 SNCAP37840 140 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 PRDX4Q13162 271 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 FAM27BQ5VT28 67 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 ZDHHC23Q8IYP9 409 aa14.01□□□□□ -0.17
PCDH1-203ENST00000394536 NFAM1Q8NET5 270 aaPredicted RBP14.01□□□□□ -0.17
PCDH1-203ENST00000394536 PLPPR2Q96GM1 343 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms