RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 TRAV24A0A0B4J272 114 aa18.1■□□□□ 0.49
SPHK1-202ENST00000392496 F5H5P2 479 aa18.1■□□□□ 0.49
SPHK1-202ENST00000392496 DEGS1O15121 323 aa18.1■□□□□ 0.49
SPHK1-202ENST00000392496 CD40P25942 277 aa18.1■□□□□ 0.49
SPHK1-202ENST00000392496 CASP6P55212 293 aa18.1■□□□□ 0.49
SPHK1-202ENST00000392496 IFITM2Q01629 132 aa18.1■□□□□ 0.49
SPHK1-202ENST00000392496 MSMPQ1L6U9 139 aa18.1■□□□□ 0.49
SPHK1-202ENST00000392496 C22orf34Q6ZV56 151 aa18.1■□□□□ 0.49
SPHK1-202ENST00000392496 TMEM230Q96A57 120 aa18.1■□□□□ 0.49
SPHK1-202ENST00000392496 RTBDNQ9BSG5 229 aaPredicted RBP18.1■□□□□ 0.49
SPHK1-202ENST00000392496 HES4Q9HCC6 221 aa18.1■□□□□ 0.49
SPHK1-202ENST00000392496 MSL2Q9HCI7 577 aa18.1■□□□□ 0.49
SPHK1-202ENST00000392496 Q9N2K0 584 aa18.1■□□□□ 0.49
SPHK1-202ENST00000392496 PLSCR3Q9NRY6 295 aa18.1■□□□□ 0.49
SPHK1-202ENST00000392496 MGAT4AQ9UM21 535 aa18.1■□□□□ 0.49
SPHK1-202ENST00000392496 G3V3Q6 166 aa18.09■□□□□ 0.49
SPHK1-202ENST00000392496 NXPH2O95156 264 aa18.09■□□□□ 0.49
SPHK1-202ENST00000392496 DUS4LO95620 317 aaKnown RBP18.09■□□□□ 0.49
SPHK1-202ENST00000392496 ZNF146Q15072 292 aa18.09■□□□□ 0.49
SPHK1-202ENST00000392496 SPIN3Q5JUX0 258 aa18.09■□□□□ 0.49
SPHK1-202ENST00000392496 LAMTOR1Q6IAA8 161 aa18.09■□□□□ 0.49
SPHK1-202ENST00000392496 OR11H4Q8NGC9 324 aa18.09■□□□□ 0.49
SPHK1-202ENST00000392496 PHB2Q99623 299 aa18.09■□□□□ 0.49
SPHK1-202ENST00000392496 DPCDQ9BVM2 203 aaPredicted RBP18.09■□□□□ 0.49
SPHK1-202ENST00000392496 WDR13Q9H1Z4 485 aa18.09■□□□□ 0.49
SPHK1-202ENST00000392496 PAIP2BQ9ULR5 123 aaKnown RBP18.09■□□□□ 0.49
SPHK1-202ENST00000392496 MEMO1Q9Y316 297 aa18.09■□□□□ 0.49
SPHK1-202ENST00000392496 SPTA1P02549 2419 aa18.09■□□□□ 0.49
SPHK1-202ENST00000392496 TRBV6-6A0A0A6YYG2 114 aa18.09■□□□□ 0.49
SPHK1-202ENST00000392496 HLA-GP17693 338 aa18.09■□□□□ 0.49
SPHK1-202ENST00000392496 H2BFSP57053 126 aa18.09■□□□□ 0.49
SPHK1-202ENST00000392496 KLF3P57682 345 aaPredicted RBP18.09■□□□□ 0.49
SPHK1-202ENST00000392496 LPCAT3Q6P1A2 487 aa18.09■□□□□ 0.49
SPHK1-202ENST00000392496 C11orf88Q6PI97 169 aa18.09■□□□□ 0.49
SPHK1-202ENST00000392496 FIP1L1Q6UN15 594 aaKnown RBP18.09■□□□□ 0.49
SPHK1-202ENST00000392496 C9orf62Q8N4C0 152 aa18.09■□□□□ 0.49
SPHK1-202ENST00000392496 ST6GALNAC3Q8NDV1 305 aa18.09■□□□□ 0.49
SPHK1-202ENST00000392496 TMEM171Q8WVE6 324 aa18.09■□□□□ 0.49
SPHK1-202ENST00000392496 DUSP13Q9UII6 198 aa18.09■□□□□ 0.49
SPHK1-202ENST00000392496 IGLV3-9A0A075B6K5 115 aa18.08■□□□□ 0.48
SPHK1-202ENST00000392496 TRGV8A0A0C4DH27 118 aa18.08■□□□□ 0.48
SPHK1-202ENST00000392496 ATP6V1G2-DDX39BF2Z307 99 aa18.08■□□□□ 0.48
SPHK1-202ENST00000392496 SIX6O95475 246 aa18.08■□□□□ 0.48
SPHK1-202ENST00000392496 PGAM2P15259 253 aa18.08■□□□□ 0.48
SPHK1-202ENST00000392496 ZNF44P15621 663 aa18.08■□□□□ 0.48
SPHK1-202ENST00000392496 VAMP1P23763 118 aa18.08■□□□□ 0.48
SPHK1-202ENST00000392496 LRP11Q86VZ4 500 aa18.08■□□□□ 0.48
SPHK1-202ENST00000392496 OPN4Q9UHM6 478 aa18.08■□□□□ 0.48
SPHK1-202ENST00000392496 C14orf166Q9Y224 244 aaKnown RBP18.08■□□□□ 0.48
SPHK1-202ENST00000392496 ITPR1Q14643 2758 aa18.08■□□□□ 0.48
SPHK1-202ENST00000392496 POM121CA8CG34 1229 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 HSPB6O14558 160 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 HS3ST1O14792 307 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 RGS11O94810 467 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 CTSDP07339 412 aaPredicted RBP18.07■□□□□ 0.48
SPHK1-202ENST00000392496 PPP3CBP16298 524 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 MDH2P40926 338 aaKnown RBP18.07■□□□□ 0.48
SPHK1-202ENST00000392496 CD200P41217 278 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 GLP1RP43220 463 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 BAMBIQ13145 260 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 SHEQ5VZ18 495 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 TMEM108Q6UXF1 575 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 RDH5Q92781 318 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 TMEM246Q9BRR3 403 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 TREM2Q9NZC2 230 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 TLN1Q9Y490 2541 aaKnown RBP18.07■□□□□ 0.48
SPHK1-202ENST00000392496 A0A0B4J2A0 478 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 IGHV3-64DA0A0J9YX35 117 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 KIR2DS1A0A191URI9 304 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 C3orf80F5H4A9 247 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 SH2D1BO14796 132 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 RGS13O14921 159 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 SFT2D2O95562 160 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 GLRA1P23415 457 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 PTAFRP25105 342 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 CA7P43166 264 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 KIR2DS4P43632 304 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 KIR2DS1Q14954 304 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 LY6G6FQ5SQ64 297 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 DCAF12L2Q5VW00 463 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 PRAMEF6Q5VXH4 476 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 WDR82Q6UXN9 313 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 NUP37Q8NFH4 326 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 OR5M8Q8NGP6 311 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 MRPL30Q8TCC3 161 aaKnown RBP18.07■□□□□ 0.48
SPHK1-202ENST00000392496 LIME1Q9H400 295 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 SHPKQ9UHJ6 478 aa18.07■□□□□ 0.48
SPHK1-202ENST00000392496 RP1L1Q8IWN7 2480 aaPredicted RBP18.06■□□□□ 0.48
SPHK1-202ENST00000392496 A6NLC8 198 aa18.06■□□□□ 0.48
SPHK1-202ENST00000392496 PTBP3O95758 552 aaKnown RBP18.06■□□□□ 0.48
SPHK1-202ENST00000392496 OR2H2O95918 312 aa18.06■□□□□ 0.48
SPHK1-202ENST00000392496 PI3P19957 117 aa18.06■□□□□ 0.48
SPHK1-202ENST00000392496 SRSF4Q08170 494 aaKnown RBP18.06■□□□□ 0.48
SPHK1-202ENST00000392496 Q5BKY6 102 aa18.06■□□□□ 0.48
SPHK1-202ENST00000392496 LIN54Q6MZP7 749 aa18.06■□□□□ 0.48
SPHK1-202ENST00000392496 ZNF880Q6PDB4 577 aa18.06■□□□□ 0.48
SPHK1-202ENST00000392496 CASTOR1Q8WTX7 329 aa18.06■□□□□ 0.48
SPHK1-202ENST00000392496 CLEC4MQ9H2X3 399 aaPredicted RBP18.06■□□□□ 0.48
SPHK1-202ENST00000392496 SLA2Q9H6Q3 261 aa18.06■□□□□ 0.48
SPHK1-202ENST00000392496 HSPB11Q9Y547 144 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms