RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 AKIRIN2Q53H80 203 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 PIP5KL1Q5T9C9 394 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 TSPO2Q5TGU0 170 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 ANKRD22Q5VYY1 191 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 C22orf42Q6IC83 251 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 REEP3Q6NUK4 255 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 CYHR1Q6ZMK1 362 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 TEX43Q6ZNM6 134 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 Q6ZVH6 145 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 LYG2Q86SG7 212 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 SCD5Q86SK9 330 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 ANGPTL5Q86XS5 388 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 COMMD1Q8N668 190 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 GATSQ8NAP1 163 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 OR4A4PQ8NGN8 299 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 OR13D1Q8NGV5 346 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 OR5B3Q8NH48 314 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 OR4S2Q8NH73 311 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 DCAKDQ8WVC6 231 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 ASB13Q8WXK3 278 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 RGP1Q92546 391 aaPredicted RBP1.98□□□□□ -2.09
PTPRC-205ENST00000391970 RAB1CQ92928 201 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 FAM104AQ969W3 186 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 FAM3DQ96BQ1 224 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 DCUN1D1Q96GG9 259 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 HYLS1Q96M11 299 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 COL21A1Q96P44 957 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 STACQ99469 402 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 EBNA1BP2Q99848 306 aaKnown RBP1.98□□□□□ -2.09
PTPRC-205ENST00000391970 APOL4Q9BPW4 351 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 NIPSNAP1Q9BPW8 284 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 PDCD10Q9BUL8 212 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 CCDC90BQ9GZT6 254 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 LINC00597Q9H2U6 94 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 GEMIN7Q9H840 131 aaKnown RBP1.98□□□□□ -2.09
PTPRC-205ENST00000391970 CSNK1G1Q9HCP0 422 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 NLE1Q9NVX2 485 aaPredicted RBP1.98□□□□□ -2.09
PTPRC-205ENST00000391970 SDHAF2Q9NX18 166 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 FBXL12Q9NXK8 326 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 COPZ2Q9P299 210 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 ZNF629Q9UEG4 869 aaPredicted RBP1.98□□□□□ -2.09
PTPRC-205ENST00000391970 SCML1Q9UN30 329 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 RNF11Q9Y3C5 154 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 POLR3HQ9Y535 204 aaPredicted RBP1.98□□□□□ -2.09
PTPRC-205ENST00000391970 LRP6O75581 1613 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 ARHGAP21Q5T5U3 1957 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 FLT4P35916 1363 aa1.98□□□□□ -2.09
PTPRC-205ENST00000391970 TIAM2Q8IVF5 1701 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 ARAP2Q8WZ64 1704 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 TRBV9A0A0B4J1U6 114 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 PDZK1P1A8MUH7 402 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 TMX2-CTNND1H3BSU7 103 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 H7C2Y5 167 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 J3QRK9 145 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 M0QYV0 167 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 AIPO00170 330 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 CHMP2AO43633 222 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 ICOSLGO75144 302 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 GGCTO75223 188 aaKnown RBP1.97□□□□□ -2.09
PTPRC-205ENST00000391970 SCO1O75880 301 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 SRP72O76094 671 aaKnown RBP1.97□□□□□ -2.09
PTPRC-205ENST00000391970 CCL2P13500 99 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 DDTP30046 118 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 LCN1P31025 176 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 SDC4P31431 198 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 MPIP34949 423 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 CSKP41240 450 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 CYB561P49447 251 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 CSNK1EP49674 416 aaKnown RBP1.97□□□□□ -2.09
PTPRC-205ENST00000391970 PPOXP50336 477 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 RGS8P57771 180 aaPredicted RBP1.97□□□□□ -2.09
PTPRC-205ENST00000391970 AP3S2P59780 193 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 PKIAP61925 76 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 TWF1Q12792 350 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 SLAQ13239 276 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 GGTLC2Q14390 218 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 GUK1Q16774 197 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 CEACAM21Q3KPI0 293 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 SOHLH1Q5JUK2 328 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 SYPL2Q5VXT5 272 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 ZNF470Q6ECI4 717 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 XAF1Q6GPH4 301 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 ULK3Q6PHR2 472 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 ZNF773Q6PK81 442 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 DUX4L9Q6RFH8 374 aaPredicted RBP1.97□□□□□ -2.09
PTPRC-205ENST00000391970 CASP12Q6UXS9 341 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 ALKAL1Q6UXT8 129 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 FBXW12Q6X9E4 464 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 ABHD13Q7L211 337 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 NDUFAF7Q7L592 441 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 PID1Q7Z2X4 250 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 OAFQ86UD1 273 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 PCP2Q8IVA1 136 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 C4orf33Q8N1A6 199 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 ZNF786Q8N393 782 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 C12orf45Q8N5I9 185 aaPredicted RBP1.97□□□□□ -2.09
PTPRC-205ENST00000391970 PRELID2Q8N945 189 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 ACBD4Q8NC06 268 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 OR51D1Q8NGF3 324 aa1.97□□□□□ -2.09
PTPRC-205ENST00000391970 OR10G4Q8NGN3 311 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms