RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 NME5P56597 212 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 ACTBP60709 375 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 CDC42P60953 191 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 PON3Q15166 354 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 ZBTB6Q15916 424 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 PTGISQ16647 500 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 CFAP126Q5VTH2 177 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 NCEH1Q6PIU2 408 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 CD300LGQ6UXG3 332 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 PID1Q7Z2X4 250 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 ZNF410Q86VK4 478 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 TBC1D21Q8IYX1 336 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 TAGAPQ8N103 731 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 LINC00311Q8N616 119 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 LEMD2Q8NC56 503 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC26A10Q8NG04 563 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR4X2Q8NGF9 303 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 OR10Z1Q8NGY1 313 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 WDR36Q8NI36 951 aaKnown RBP-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 FANK1Q8TC84 345 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 TNFAIP8L1Q8WVP5 186 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 AQP3Q92482 292 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 ADIPOR1Q96A54 375 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 LRRC59Q96AG4 307 aaKnown RBP-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 APOBEC3DQ96AK3 386 aaPredicted RBP-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 FAM3DQ96BQ1 224 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 SGK3Q96BR1 496 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLAMF6Q96DU3 332 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 GDAP1L1Q96MZ0 367 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 PANX1Q96RD7 426 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 RNF2Q99496 336 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 UTP14AQ9BVJ6 771 aaKnown RBP-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 GPR174Q9BXC1 333 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLIRPQ9GZT3 109 aaKnown RBP-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 NXF5Q9H1B4 397 aaKnown RBP-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC38A1Q9H2H9 487 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 C5orf66Q9H5L9 145 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 TMEM231Q9H6L2 316 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 RANBP3Q9H6Z4 567 aaPredicted RBP-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 MRPL47Q9HD33 250 aaKnown RBP-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 ASCL3Q9NQ33 180 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 PNO1Q9NRX1 252 aaKnown RBP-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 C1orf123Q9NWV4 160 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 NSMCE4AQ9NXX6 385 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 PISDQ9UG56 409 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 VPS28Q9UK41 221 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 COPS3Q9UNS2 423 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 PSG8Q9UQ74 426 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 ERVK-19Q9WJR5 959 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 RUVBL2Q9Y230 463 aaKnown RBP-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 PIGLQ9Y2B2 252 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 NUP155O75694 1391 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 KIAA0232Q92628 1395 aa-1.85□□□□□ -2.71
RNU6-540P-201ENST00000384622 KIAA0586Q9BVV6 1533 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 PHLPP2Q6ZVD8 1323 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 ROBO1Q9Y6N7 1651 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 ARAP1Q96P48 1450 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 DNMT1P26358 1616 aaKnown RBP-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 TRAV30A0A087WSZ9 112 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 TRAV10A0A0B4J240 114 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 TRAV3A0A0B4J244 114 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 DAPL1A0PJW8 107 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 IGSF23A1L1A6 192 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 PLAC8L1A1L4L8 177 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 CASKO14936 926 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 NPFFO15130 113 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 FGF16O43320 207 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 MITFO75030 526 aaPredicted RBP-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 AGR2O95994 175 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 IFNA21P01568 189 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 IFNA17P01571 189 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 ATP5BP06576 529 aaKnown RBP-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 UBTFL6P0CB48 400 aaPredicted RBP-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 MYL6BP14649 208 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 MUTP22033 750 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 S100A3P33764 101 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 CTNNA1P35221 906 aaKnown RBP-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 SAA4P35542 130 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 CASP2P42575 452 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 NOVA1P51513 510 aaKnown RBP-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC18A1P54219 525 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 TAS2R19P59542 299 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 PTPRCAPQ14761 206 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLMAPQ14BN4 828 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC15A2Q16348 729 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 SLC36A2Q495M3 483 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 SMUG1Q53HV7 270 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 FAM78AQ5JUQ0 283 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 LDLRAP1Q5SW96 308 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 LYPLAL1Q5VWZ2 237 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 NXNL2Q5VZ03 156 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 TMEM215Q68D42 235 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 DEGS2Q6QHC5 323 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 AGTRAPQ6RW13 159 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 HEPN1Q6WQI6 88 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 PLEKHG7Q6ZR37 379 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 C1orf186Q6ZWK4 172 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 PGAP1Q75T13 922 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 PAGE2Q7Z2X7 111 aa-1.86□□□□□ -2.71
RNU6-540P-201ENST00000384622 C6orf201Q7Z4U5 140 aa-1.86□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms