RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 PRDX1Q06830 199 aaKnown RBP13.13□□□□□ -0.31
VLDLR-202ENST00000382099 ARL6IP1Q15041 203 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 KCNIP4Q6PIL6 250 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 LHFPL1Q86WI0 220 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 ATOH7Q8N100 152 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 RAB42Q8N4Z0 105 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 SMIM12Q96EX1 92 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 CAPNS2Q96L46 248 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 RASL10BQ96S79 203 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 ZNF703Q9H7S9 590 aaPredicted RBP13.13□□□□□ -0.31
VLDLR-202ENST00000382099 LRIT1Q9P2V4 623 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 TBX21Q9UL17 535 aa13.13□□□□□ -0.31
VLDLR-202ENST00000382099 IGHV2OR16-5A0A0B4J2B6 119 aa13.12□□□□□ -0.31
VLDLR-202ENST00000382099 IGKV1-8A0A0C4DH67 115 aa13.12□□□□□ -0.31
VLDLR-202ENST00000382099 CT45A8P0DMV1 189 aa13.12□□□□□ -0.31
VLDLR-202ENST00000382099 CT45A9P0DMV2 189 aa13.12□□□□□ -0.31
VLDLR-202ENST00000382099 FSTP19883 344 aa13.12□□□□□ -0.31
VLDLR-202ENST00000382099 TLE3Q04726 772 aa13.12□□□□□ -0.31
VLDLR-202ENST00000382099 CT45A2Q5DJT8 189 aa13.12□□□□□ -0.31
VLDLR-202ENST00000382099 TCF23Q7RTU1 214 aa13.12□□□□□ -0.31
VLDLR-202ENST00000382099 CISD2Q8N5K1 135 aaKnown RBP13.12□□□□□ -0.31
VLDLR-202ENST00000382099 RTN4IP1Q8WWV3 396 aaPredicted RBP13.12□□□□□ -0.31
VLDLR-202ENST00000382099 GNPNAT1Q96EK6 184 aaPredicted RBP13.12□□□□□ -0.31
VLDLR-202ENST00000382099 BOD1Q96IK1 185 aa13.12□□□□□ -0.31
VLDLR-202ENST00000382099 MRGPRX1Q96LB2 322 aa13.12□□□□□ -0.31
VLDLR-202ENST00000382099 DOCK11Q5JSL3 2073 aa13.12□□□□□ -0.31
VLDLR-202ENST00000382099 HMGB3O15347 200 aaKnown RBP13.12□□□□□ -0.31
VLDLR-202ENST00000382099 MESP2Q0VG99 397 aa13.12□□□□□ -0.31
VLDLR-202ENST00000382099 CATSPERDQ86XM0 798 aa13.12□□□□□ -0.31
VLDLR-202ENST00000382099 OR8G5Q8NG78 346 aa13.12□□□□□ -0.31
VLDLR-202ENST00000382099 OR4B1Q8NGF8 309 aa13.12□□□□□ -0.31
VLDLR-202ENST00000382099 PINX1Q96BK5 328 aaKnown RBP13.12□□□□□ -0.31
VLDLR-202ENST00000382099 SELENOKQ9Y6D0 94 aa13.12□□□□□ -0.31
VLDLR-202ENST00000382099 A0A1W2PPV9 198 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 K7EQS6 105 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 PHF1O43189 567 aaPredicted RBP13.11□□□□□ -0.31
VLDLR-202ENST00000382099 BMP5P22003 454 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 TMEM50BP56557 158 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 DAZLQ92904 295 aaKnown RBP13.11□□□□□ -0.31
VLDLR-202ENST00000382099 CLN8Q9UBY8 286 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 H3BP45 60 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 HSD11B1P28845 292 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 BLVRBP30043 206 aaPredicted RBP13.11□□□□□ -0.31
VLDLR-202ENST00000382099 FFAR4Q5NUL3 377 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 PSMF1Q92530 271 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 ZDHHC11Q9H8X9 412 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 TCF20Q9UGU0 1960 aaKnown RBP13.11□□□□□ -0.31
VLDLR-202ENST00000382099 VSTM2BA6NLU5 285 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 ZNF850A8MQ14 1090 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 RAB29O14966 203 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 EML5Q05BV3 1969 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 ZNF154Q13106 437 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 ELAVL3Q14576 367 aaKnown RBP13.11□□□□□ -0.31
VLDLR-202ENST00000382099 SFTPA1Q8IWL2 248 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 SHISA5Q8N114 240 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 PYGO2Q9BRQ0 406 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 THSD7BQ9C0I4 1608 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 ZBP1Q9H171 429 aa13.11□□□□□ -0.31
VLDLR-202ENST00000382099 CISD1Q9NZ45 108 aaKnown RBP13.11□□□□□ -0.31
VLDLR-202ENST00000382099 RTTNQ86VV8 2226 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 A0A1W2PR80 420 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 CEACAM18A8MTB9 384 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 RNF212BA8MTL3 300 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 WDR1O75083 606 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 HYPMO75409 117 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 TOMM40O96008 361 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 OR3A4PP47883 348 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 CLDN17P56750 224 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 RPL23P62829 140 aaKnown RBP13.1□□□□□ -0.31
VLDLR-202ENST00000382099 ADAT3Q96EY9 351 aaPredicted RBP13.1□□□□□ -0.31
VLDLR-202ENST00000382099 WNT10AQ9GZT5 417 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 SLC45A2Q9UMX9 530 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.1□□□□□ -0.31
VLDLR-202ENST00000382099 WNT6Q9Y6F9 365 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 WDFY3Q8IZQ1 3526 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 KIAA2026Q5HYC2 2103 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 ODAMA1E959 279 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 EFEMP2O95967 443 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 CTSDP07339 412 aaPredicted RBP13.1□□□□□ -0.31
VLDLR-202ENST00000382099 TCN2P20062 427 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 NKX2-1P43699 371 aaPredicted RBP13.1□□□□□ -0.31
VLDLR-202ENST00000382099 RPS4XP62701 263 aaKnown RBP13.1□□□□□ -0.31
VLDLR-202ENST00000382099 HYAL1Q12794 435 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 PDGFRLQ15198 375 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 MSMO1Q15800 293 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 H1FOOQ8IZA3 346 aaPredicted RBP13.1□□□□□ -0.31
VLDLR-202ENST00000382099 CRIPAKQ8N1N5 446 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 FOXQ1Q9C009 403 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 NKX2-4Q9H2Z4 354 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 PARLQ9H300 379 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.1□□□□□ -0.31
VLDLR-202ENST00000382099 C19orf53Q9UNZ5 99 aaPredicted RBP13.1□□□□□ -0.31
VLDLR-202ENST00000382099 OBSL1O75147 1896 aa13.1□□□□□ -0.31
VLDLR-202ENST00000382099 CRYM-AS1A6NIL9 109 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 MSTNO14793 375 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 SERF1AO75920 110 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 FREM3P0C091 2139 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 IL3RAP26951 378 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 VIPR2P41587 438 aa13.09□□□□□ -0.31
VLDLR-202ENST00000382099 FAM57BQ71RH2 274 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms