RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 MFNGO00587 321 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 OGG1O15527 345 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 HLA-DRB5Q30154 266 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 FAM209AQ5JX71 171 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 THSD4Q6ZMP0 1018 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 ADIPOR1Q96A54 375 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 ICAM5Q9UMF0 924 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 DOCK3Q8IZD9 2030 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 OTOFQ9HC10 1997 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 RALGAPA2Q2PPJ7 1873 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 RER1O15258 196 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 IGHV4-34P06331 123 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 KIR2DS2P43631 304 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 TRAT1Q6PIZ9 186 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 SFTPA1Q8IWL2 248 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 P4HTMQ9NXG6 502 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 PLA2G10O15496 165 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 OR10G8Q8NGN5 311 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 PECRQ9BY49 303 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 MS4A7Q9GZW8 240 aaPredicted RBP12.37□□□□□ -0.43
SNPH-201ENST00000381867 H3BMH7 237 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 ACAA1P09110 424 aaPredicted RBP12.37□□□□□ -0.43
SNPH-201ENST00000381867 OPRK1P41145 380 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 POLR2GP62487 172 aaKnown RBP eCLIP12.37□□□□□ -0.43
SNPH-201ENST00000381867 ZNF770Q6IQ21 691 aaPredicted RBP12.37□□□□□ -0.43
SNPH-201ENST00000381867 RPS4Y2Q8TD47 263 aa12.37□□□□□ -0.43
SNPH-201ENST00000381867 ZNF107Q9UII5 783 aaPredicted RBP12.37□□□□□ -0.43
SNPH-201ENST00000381867 PTPRZ1P23471 2315 aaPredicted RBP12.37□□□□□ -0.43
SNPH-201ENST00000381867 OR2W5A6NFC9 320 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 ZNF253O75346 499 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 ALKBH6Q3KRA9 238 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 OR1L4Q8NGR5 311 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 SMOC1Q9H4F8 434 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 AMDHD2Q9Y303 409 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 RBP4P02753 201 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 HES3Q5TGS1 186 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 SH2D2AQ9NP31 389 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 EPOPA6NHQ4 379 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 ALG1L2C9J202 215 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 KLF9Q13886 244 aaPredicted RBP12.36□□□□□ -0.43
SNPH-201ENST00000381867 C21orf62-AS1Q17RA5 79 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 SLC25A42Q86VD7 318 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 UBALD1Q8TB05 177 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 CAMPP49913 170 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 SPRED2Q7Z698 418 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 MEGF10Q96KG7 1140 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 PARP11Q9NR21 331 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 MRM2Q9UI43 246 aaKnown RBP12.36□□□□□ -0.43
SNPH-201ENST00000381867 VAX2Q9UIW0 290 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 ZNF638Q14966 1978 aaKnown RBP12.36□□□□□ -0.43
SNPH-201ENST00000381867 B4E171 279 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 CDC42EP2O14613 210 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 TSPAN7P41732 249 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 ABLIM2Q6H8Q1 611 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 OR5AU1Q8NGC0 362 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 OR4C3Q8NH37 302 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 CA5BP1Q8WTZ4 195 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 CHAC2Q8WUX2 184 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 RAB33BQ9H082 229 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 TMEM167BQ9NRX6 74 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 PITPNC1Q9UKF7 332 aa12.36□□□□□ -0.43
SNPH-201ENST00000381867 OR2M5A3KFT3 312 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 ADAM11O75078 769 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 SEMA7AO75326 666 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 SP1P08047 785 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 PRICKLE4Q2TBC4 344 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 SARGQ9BW04 601 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 SLC7A10Q9NS82 523 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 PSG11Q9UQ72 335 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 RPS4Y1P22090 263 aaKnown RBP12.35□□□□□ -0.43
SNPH-201ENST00000381867 DPPA3Q6W0C5 159 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 RAB24Q969Q5 203 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 WDR54Q9H977 334 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 FAM90A27PA6NNH2 459 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 SHISA8B8ZZ34 492 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 MNX1P50219 401 aaPredicted RBP12.35□□□□□ -0.43
SNPH-201ENST00000381867 RAB7AP51149 207 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 IRF3Q14653 427 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 FAM74A3Q4VXF1 159 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 ELF5Q9UKW6 265 aaPredicted RBP12.35□□□□□ -0.43
SNPH-201ENST00000381867 C11orf94C9JXX5 98 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 STAG3L2P0CL84 134 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 HIST3H3Q16695 136 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 WIPI1Q5MNZ9 446 aaPredicted RBP12.35□□□□□ -0.43
SNPH-201ENST00000381867 MOB3BQ86TA1 216 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 OR2Y1Q8NGV0 311 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 BLNKQ8WV28 456 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 ZG16BQ96DA0 208 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 TRMT61AQ96FX7 289 aaKnown RBP12.35□□□□□ -0.43
SNPH-201ENST00000381867 RNF2Q99496 336 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 OR2D2Q9H210 308 aa12.35□□□□□ -0.43
SNPH-201ENST00000381867 ZNF345Q14585 488 aa12.34□□□□□ -0.43
SNPH-201ENST00000381867 MCHR2Q969V1 340 aa12.34□□□□□ -0.43
SNPH-201ENST00000381867 KCNK15Q9H427 330 aa12.34□□□□□ -0.43
SNPH-201ENST00000381867 ESRP2Q9H6T0 727 aaKnown RBP12.34□□□□□ -0.43
SNPH-201ENST00000381867 BCL3P20749 454 aa12.34□□□□□ -0.43
SNPH-201ENST00000381867 FNDC7Q5VTL7 733 aa12.34□□□□□ -0.43
SNPH-201ENST00000381867 MISP3Q96FF7 219 aa12.34□□□□□ -0.43
SNPH-201ENST00000381867 LHX9Q9NQ69 397 aa12.34□□□□□ -0.43
SNPH-201ENST00000381867 ZNF71Q9NQZ8 489 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms