RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 SGK3Q96BR1 496 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 FBXO17Q96EF6 278 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 CPNE2Q96FN4 548 aaPredicted RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 C2orf50Q96LR7 162 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 S100A13Q99584 98 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 TSNAXQ99598 290 aaKnown RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 ZNF2Q9BSG1 426 aaPredicted RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 FAAP24Q9BTP7 215 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 SLC26A1Q9H2B4 701 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 HRH4Q9H3N8 390 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 PIGMQ9H3S5 423 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 SAP30LQ9HAJ7 183 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 PROK2Q9HC23 129 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 SEPSECSQ9HD40 501 aaKnown RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 RAB18Q9NP72 206 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 PLEKHJ1Q9NW61 149 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 C19orf25Q9UFG5 118 aaPredicted RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 DKKL1Q9UK85 242 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 FAM96BQ9Y3D0 163 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 HDGFL3Q9Y3E1 203 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 PTRH2Q9Y3E5 179 aaKnown RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 V9GYS6 101 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 VPS13AQ96RL7 3174 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 TRBV6-7A0A0A0MS04 114 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 IGHV1-45A0A0A0MS14 117 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 A0A0J9YW62 118 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 LOC102725191A0A1B0GVB3 256 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 RAB19A4D1S5 217 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 CEACAM18A8MTB9 384 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 ZNF705EA8MWA4 302 aaPredicted RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 M0R135 149 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 AGPAT2O15120 278 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 TNRC18O15417 2968 aaPredicted RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 DHHO43323 396 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 ZIC3O60481 467 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 LRP3O75074 770 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 DHRS3O75911 302 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 ATG12O94817 140 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 IFNA2P01563 188 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 IGLV3-1P01715 115 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 MBPP02686 304 aaPredicted RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 SERPINA5P05154 406 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 UMODP07911 640 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 FAM157CP0CG43 387 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 LYL1P12980 280 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 CCL4P13236 92 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 LIFP15018 202 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 RPS2P15880 293 aaKnown RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 ZNF708P17019 499 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 ACKR3P25106 362 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 DUSP1P28562 367 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 OPRM1P35372 400 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 SSR4P51571 173 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 TAS2R46P59540 309 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 LSM6P62312 80 aaKnown RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 H3F3AP84243 136 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 RBM39Q14498 530 aaKnown RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 ZNF239Q16600 458 aaKnown RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 SP6Q3SY56 376 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 PABPC1L2AQ5JQF8 200 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 LYSMD4Q5XG99 296 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 RPL7L1Q6DKI1 246 aaKnown RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 ZNF774Q6NX45 483 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 HAGHLQ6PII5 290 aaPredicted RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 SLC22A25Q6T423 547 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 UQCC3Q6UW78 93 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 Q7L0L9 218 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 YRDCQ86U90 279 aaKnown RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 CBLN2Q8IUK8 224 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 OR9K2Q8NGE7 335 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 OR4A4PQ8NGN8 299 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 AKR7LQ8NHP1 331 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 STOML3Q8TAV4 291 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 SAP25Q8TEE9 199 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 HAS2Q92819 552 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 EMG1Q92979 244 aaKnown RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 ARL11Q969Q4 196 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 MRPL24Q96A35 216 aaKnown RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 ZNF799Q96GE5 643 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 SCGB3A2Q96PL1 93 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 NAA11Q9BSU3 229 aaPredicted RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 ANGPTL4Q9BY76 406 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 SRXN1Q9BYN0 137 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 SMIM3Q9BZL3 60 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 ULBP2Q9BZM5 246 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 SLC5A7Q9GZV3 580 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 PARP12Q9H0J9 701 aaKnown RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 TLNRD1Q9H1K6 362 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 LIME1Q9H400 295 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 SAV1Q9H4B6 383 aaPredicted RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 PCDHB16Q9NRJ7 776 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 TMEM100Q9NV29 134 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 HPF1Q9NWY4 346 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 PLEK2Q9NYT0 353 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 ZNF629Q9UEG4 869 aaPredicted RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 AK3Q9UIJ7 227 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 C14orf166Q9Y224 244 aaKnown RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 LSM5Q9Y4Y9 91 aaKnown RBP3.19□□□□□ -1.9
SMC6-202ENST00000381272 PCDHGA1Q9Y5H4 931 aa3.19□□□□□ -1.9
SMC6-202ENST00000381272 SDK2Q58EX2 2172 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms