RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 DOCK10Q96BY6 2186 aa14.04□□□□□ -0.16
NKX3-1-201ENST00000380871 UBE2CO00762 179 aa14.04□□□□□ -0.16
NKX3-1-201ENST00000380871 GPR137BO60478 399 aa14.04□□□□□ -0.16
NKX3-1-201ENST00000380871 SEC11BP0C7V7 166 aa14.04□□□□□ -0.16
NKX3-1-201ENST00000380871 RAB5AP20339 215 aa14.04□□□□□ -0.16
NKX3-1-201ENST00000380871 AADACP22760 399 aa14.04□□□□□ -0.16
NKX3-1-201ENST00000380871 CRYGSP22914 178 aa14.04□□□□□ -0.16
NKX3-1-201ENST00000380871 ECI1P42126 302 aa14.04□□□□□ -0.16
NKX3-1-201ENST00000380871 SLAMF9Q96A28 289 aa14.04□□□□□ -0.16
NKX3-1-201ENST00000380871 NIT2Q9NQR4 276 aa14.04□□□□□ -0.16
NKX3-1-201ENST00000380871 ST3GAL6Q9Y274 331 aa14.04□□□□□ -0.16
NKX3-1-201ENST00000380871 BORCS7-ASMTA0A0B4J1R7 106 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 FAM24AA6NFZ4 105 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 H7C1Q1 480 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 ATXN7O15265 892 aaPredicted RBP14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 ARL6IP1Q15041 203 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 PPA1Q15181 289 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 BORCS8Q96FH0 119 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 GALNT14Q96FL9 552 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 PUS1Q9Y606 427 aaKnown RBP eCLIP14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 TXNL1O43396 289 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 VAMP5O95183 116 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 PAX6P26367 422 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 CEBPGP53567 150 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 FOXL2NBQ6ZUU3 175 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 MAGT1Q9H0U3 335 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 CALHM2Q9HA72 323 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 C9orf172C9J069 976 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 RBP2P50120 134 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 RAC3P60763 192 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 RTL6Q6ICC9 239 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 SIGLEC12Q96PQ1 595 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 GSN-AS1Q9NRJ2 163 aa14.03□□□□□ -0.16
NKX3-1-201ENST00000380871 NKX2-6A6NCS4 301 aa14.02□□□□□ -0.16
NKX3-1-201ENST00000380871 SYNGR3O43761 229 aa14.02□□□□□ -0.16
NKX3-1-201ENST00000380871 FABP1P07148 127 aa14.02□□□□□ -0.16
NKX3-1-201ENST00000380871 OR8U8P0C7N1 319 aa14.02□□□□□ -0.16
NKX3-1-201ENST00000380871 NR2C1P13056 603 aa14.02□□□□□ -0.16
NKX3-1-201ENST00000380871 SRD5A2P31213 254 aa14.02□□□□□ -0.16
NKX3-1-201ENST00000380871 DAZAP2Q15038 168 aaPredicted RBP14.02□□□□□ -0.16
NKX3-1-201ENST00000380871 IER2Q9BTL4 223 aa14.02□□□□□ -0.16
NKX3-1-201ENST00000380871 OR51B6Q9H340 312 aa14.02□□□□□ -0.16
NKX3-1-201ENST00000380871 LRRC3CA6NJW4 275 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 ST8SIA3O43173 380 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 DUSP1P28562 367 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 POLR2GP62487 172 aaKnown RBP eCLIP14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 ATP1A1-AS1Q5TC04 95 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 ABHD17BQ5VST6 288 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 Q6ZSR3 168 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 VASH2Q86V25 355 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 ZNF561Q8N587 486 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 SPSB1Q96BD6 273 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 PRRG4Q9BZD6 226 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 IL17BQ9UHF5 180 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 NRASP01111 189 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 GLP1RP43220 463 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 NPBWR2P48146 333 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 UCP2P55851 309 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 B3GALT5-AS1P59052 145 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 EWSR1Q01844 656 aaKnown RBP eCLIP14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 ZNF92Q03936 586 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 EIF3IQ13347 325 aaKnown RBP14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 FAM27BQ5VT28 67 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 CALHM1Q8IU99 346 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 ZFP62Q8NB50 900 aaPredicted RBP14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 NTNG2Q96CW9 530 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 KCNJ16Q9NPI9 418 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 HSF4Q9ULV5 492 aa14.02□□□□□ -0.17
NKX3-1-201ENST00000380871 SVILO95425 2214 aa14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 DTYMKP23919 212 aa14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 NCMAPQ5T1S8 102 aa14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 OSR2Q8N2R0 312 aa14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 OR2V1Q8NHB1 315 aa14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 PIGCQ92535 297 aa14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 A0A1W2PNU3 283 aaPredicted RBP14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 IGSF23A1L1A6 192 aa14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 GJE1A6NN92 205 aa14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 ZNF587BE7ETH6 402 aa14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 OR7C1O76099 320 aaPredicted RBP14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 FBP1P09467 338 aa14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 FKBP2P26885 142 aaKnown RBP14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 S100A12P80511 92 aa14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 PLGLB1Q02325 96 aa14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 SSPNQ14714 243 aa14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 GGNQ86UU5 652 aa14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 TMEM171Q8WVE6 324 aa14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 BOD1Q96IK1 185 aa14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 SLC35B3Q9H1N7 401 aa14.01□□□□□ -0.17
NKX3-1-201ENST00000380871 TRAV20A0A0B4J274 112 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 HSPB6O14558 160 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 TERTO14746 1132 aaKnown RBP14□□□□□ -0.17
NKX3-1-201ENST00000380871 FOXG1P55316 489 aaPredicted RBP14□□□□□ -0.17
NKX3-1-201ENST00000380871 HMGN3Q15651 99 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 LGI3Q8N145 548 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 OR1F12Q8NHA8 337 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 SUCNR1Q9BXA5 334 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 ZNF442Q9H7R0 627 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 SH2D2AQ9NP31 389 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 ZNF727A8MUV8 499 aa14□□□□□ -0.17
NKX3-1-201ENST00000380871 C3orf80F5H4A9 247 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms