RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 SLC25A53Q5H9E4 307 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 TP53RKQ96S44 253 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 DOK1Q99704 481 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 IFITM10A6NMD0 228 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 ETHE1O95571 254 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 OTX1P32242 354 aaPredicted RBP11.01□□□□□ -0.65
CHD3-203ENST00000380358 IGFBP7Q16270 282 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 CLLU1Q5K131 121 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 SLIT3O75094 1523 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 TMEM272A0A1B0GTI8 110 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.01□□□□□ -0.65
CHD3-203ENST00000380358 AP4M1O00189 453 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 CCL4P13236 92 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 LINC00303Q3SY05 128 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 CCL27Q9Y4X3 112 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 HOXC11O43248 304 aaPredicted RBP11.01□□□□□ -0.65
CHD3-203ENST00000380358 GPX5O75715 221 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 CD1EP15812 388 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 PWWP2BQ6NUJ5 590 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 LDLRAD3Q86YD5 345 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 NEIL1Q96FI4 390 aaPredicted RBP11.01□□□□□ -0.65
CHD3-203ENST00000380358 TOLLIPQ9H0E2 274 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 PROB1E7EW31 1015 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 HPXP02790 462 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 HYAL1Q12794 435 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 TMEM183BQ1AE95 376 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 NTNG2Q96CW9 530 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 KIAA0100Q14667 2235 aaKnown RBP11.01□□□□□ -0.65
CHD3-203ENST00000380358 POLR2GP62487 172 aaKnown RBP eCLIP11.01□□□□□ -0.65
CHD3-203ENST00000380358 CTU2Q2VPK5 515 aaKnown RBP11.01□□□□□ -0.65
CHD3-203ENST00000380358 TMEM251Q8N6I4 163 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 AQP10Q96PS8 301 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 FIZ1Q96SL8 496 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 NEU1Q99519 415 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 GABARAPL3Q9BY60 117 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 ASB1Q9Y576 335 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 KIDINS220Q9ULH0 1771 aa11.01□□□□□ -0.65
CHD3-203ENST00000380358 IGHV3OR16-13A0A075B7E8 117 aa11□□□□□ -0.65
CHD3-203ENST00000380358 IGHV3-74A0A0B4J1X5 117 aa11□□□□□ -0.65
CHD3-203ENST00000380358 C10orf113Q5VZT2 155 aa11□□□□□ -0.65
CHD3-203ENST00000380358 SELENOKQ9Y6D0 94 aa11□□□□□ -0.65
CHD3-203ENST00000380358 MEOX2P50222 304 aa11□□□□□ -0.65
CHD3-203ENST00000380358 NXPH1P58417 271 aa11□□□□□ -0.65
CHD3-203ENST00000380358 RELBQ01201 579 aa11□□□□□ -0.65
CHD3-203ENST00000380358 HCP5Q6MZN7 132 aa11□□□□□ -0.65
CHD3-203ENST00000380358 BAP18Q8IXM2 172 aa11□□□□□ -0.65
CHD3-203ENST00000380358 SMIM19Q96E16 107 aa11□□□□□ -0.65
CHD3-203ENST00000380358 GPR61Q9BZJ8 451 aa11□□□□□ -0.65
CHD3-203ENST00000380358 SCN2AQ99250 2005 aa11□□□□□ -0.65
CHD3-203ENST00000380358 RNF212Q495C1 297 aa11□□□□□ -0.65
CHD3-203ENST00000380358 RNF165Q6ZSG1 346 aa11□□□□□ -0.65
CHD3-203ENST00000380358 PHYHIPLQ96FC7 376 aa11□□□□□ -0.65
CHD3-203ENST00000380358 PERPQ96FX8 193 aa11□□□□□ -0.65
CHD3-203ENST00000380358 LDLRAD4O15165 306 aa11□□□□□ -0.65
CHD3-203ENST00000380358 ZNF273Q14593 569 aa11□□□□□ -0.65
CHD3-203ENST00000380358 MPV17LQ2QL34 196 aa11□□□□□ -0.65
CHD3-203ENST00000380358 RHNO1Q9BSD3 238 aa11□□□□□ -0.65
CHD3-203ENST00000380358 F11RQ9Y624 299 aaKnown RBP11□□□□□ -0.65
CHD3-203ENST00000380358 IGHV3-49A0A0A0MS15 119 aa11□□□□□ -0.65
CHD3-203ENST00000380358 RGS13O14921 159 aa11□□□□□ -0.65
CHD3-203ENST00000380358 CEACAM5P06731 702 aa11□□□□□ -0.65
CHD3-203ENST00000380358 GPR6P46095 362 aaPredicted RBP11□□□□□ -0.65
CHD3-203ENST00000380358 MYEOVQ96EZ4 313 aa11□□□□□ -0.65
CHD3-203ENST00000380358 PRR32B1ATL7 298 aa11□□□□□ -0.65
CHD3-203ENST00000380358 HAND1O96004 215 aa11□□□□□ -0.65
CHD3-203ENST00000380358 HIST1H1EP10412 219 aaKnown RBP11□□□□□ -0.65
CHD3-203ENST00000380358 GABRA1P14867 456 aa11□□□□□ -0.65
CHD3-203ENST00000380358 CCR5P51681 352 aa11□□□□□ -0.65
CHD3-203ENST00000380358 SLC23A3Q6PIS1 610 aa11□□□□□ -0.65
CHD3-203ENST00000380358 CDX2Q99626 313 aaPredicted RBP11□□□□□ -0.65
CHD3-203ENST00000380358 CDCA4Q9BXL8 241 aa11□□□□□ -0.65
CHD3-203ENST00000380358 ZNF142P52746 1687 aaPredicted RBP10.99□□□□□ -0.65
CHD3-203ENST00000380358 KNL1Q8NG31 2342 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 ZNF253O75346 499 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 RPS4Y1P22090 263 aaKnown RBP10.99□□□□□ -0.65
CHD3-203ENST00000380358 ADAT3Q96EY9 351 aaPredicted RBP10.99□□□□□ -0.65
CHD3-203ENST00000380358 GHITMQ9H3K2 345 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 CDRT15L2A8MXV6 281 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 LMO7DNF2Z398 122 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 REG1AP05451 166 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 C11orf44Q8N8P7 122 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 OR10J6PQ8NGY7 276 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 MARVELD3Q96A59 401 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 OR6C3Q9NZP0 311 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 A0A1B0GU03 582 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 TGFAP01135 160 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 PELI3Q8N2H9 469 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 BVESQ8NE79 360 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 RASL12Q9NYN1 266 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 PAM16Q9Y3D7 125 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 ZNF638Q14966 1978 aaKnown RBP10.99□□□□□ -0.65
CHD3-203ENST00000380358 CORTO00230 105 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 GCAP28676 217 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 DNLZQ5SXM8 178 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 GPR27Q9NS67 375 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 IER3P46695 156 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 BAK1Q16611 211 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 MAVSQ7Z434 540 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 C1RLQ9NZP8 487 aa10.99□□□□□ -0.65
CHD3-203ENST00000380358 H3BTX0 84 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms