RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 CDRT4Q8N9R6 151 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 OR10W1Q8NGF6 305 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 OR4K13Q8NH42 304 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 OR2A5Q96R48 311 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 MACROD1Q9BQ69 325 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 AK3Q9UIJ7 227 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 PSG11Q9UQ72 335 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 TRAV26-1A0A087WT03 109 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 A0A1B0GVT2 93 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 PROB1E7EW31 1015 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 GDF9O60383 454 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 JMJD7P0C870 316 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 COL9A1P20849 921 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 ANOS1P23352 680 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 CD27P26842 260 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 GALR1P47211 349 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 NCBP2P52298 156 aaKnown RBP eCLIP6.52□□□□□ -1.37
CDKL5-201ENST00000379989 CLDN6P56747 220 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 PAX2Q02962 417 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 FAM53BQ14153 422 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 ZNF740Q8NDX6 193 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 OR4D6Q8NGJ1 314 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 CMTM2Q8TAZ6 248 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 GRHL3Q8TE85 626 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 C11orf40Q8WZ69 217 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 RTBDNQ9BSG5 229 aaPredicted RBP6.52□□□□□ -1.37
CDKL5-201ENST00000379989 G6PC2Q9NQR9 355 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 FBXO34Q9NWN3 711 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 WNT16Q9UBV4 365 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 C19orf53Q9UNZ5 99 aaPredicted RBP6.52□□□□□ -1.37
CDKL5-201ENST00000379989 IGHV1-69-2A0A0G2JMI3 117 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 LOC102723971A0A1B0GUV8 181 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 G3V4G9 280 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 HIST1H1CP16403 213 aaKnown RBP6.52□□□□□ -1.37
CDKL5-201ENST00000379989 ZNF43P17038 809 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 TSPOP30536 169 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 CEACAM3P40198 252 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 ELOA3BQ3SY89 546 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 SLC16A9Q7RTY1 509 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 C17orf82Q86X59 251 aaPredicted RBP6.52□□□□□ -1.37
CDKL5-201ENST00000379989 ZNF595Q8IYB9 648 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 TMEM123Q8N131 208 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 Q8N976 141 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 ELOA3Q8NG57 546 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 OR2G3Q8NGZ4 309 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 RHBDD1Q8TEB9 315 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 FAM222BQ8WU58 562 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 ZNF479Q96JC4 524 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 HSPB9Q9BQS6 159 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 ABHD6Q9BV23 337 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 PNO1Q9NRX1 252 aaKnown RBP6.52□□□□□ -1.37
CDKL5-201ENST00000379989 TBC1D29Q9UFV1 150 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 MRM2Q9UI43 246 aaKnown RBP6.52□□□□□ -1.37
CDKL5-201ENST00000379989 TUBD1Q9UJT1 453 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 KLHDC2Q9Y2U9 406 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 RNF114Q9Y508 228 aa6.52□□□□□ -1.37
CDKL5-201ENST00000379989 GJE1A6NN92 205 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 ZNF891A8MT65 544 aaPredicted RBP6.51□□□□□ -1.37
CDKL5-201ENST00000379989 E5RGE8 158 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 OR7C2O60412 319 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 ZIC2O95409 532 aaPredicted RBP6.51□□□□□ -1.37
CDKL5-201ENST00000379989 TIAF1O95411 115 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 DBIP07108 87 aaKnown RBP6.51□□□□□ -1.37
CDKL5-201ENST00000379989 PSMB5P28074 263 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 PEBP1P30086 187 aaKnown RBP6.51□□□□□ -1.37
CDKL5-201ENST00000379989 IGLV3-21P80748 117 aaPredicted RBP6.51□□□□□ -1.37
CDKL5-201ENST00000379989 TLE3Q04726 772 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 ODF1Q14990 250 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.51□□□□□ -1.37
CDKL5-201ENST00000379989 TMEM225Q6GV28 225 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 ZNF440Q8IYI8 595 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 C1orf174Q8IYL3 243 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 OR1N2Q8NGR9 330 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 KLHDC7BQ96G42 594 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 SLC46A1Q96NT5 459 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 NUDT9Q9BW91 350 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 LPAR5Q9H1C0 372 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 CALHM2Q9HA72 323 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 ZNF160Q9HCG1 818 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 Q9N2K0 584 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 DAPP1Q9UN19 280 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 MRPS16Q9Y3D3 137 aaKnown RBP6.51□□□□□ -1.37
CDKL5-201ENST00000379989 CEACAM18A8MTB9 384 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 SCGB1D2O95969 90 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 AK4P27144 223 aaPredicted RBP6.51□□□□□ -1.37
CDKL5-201ENST00000379989 LINC00310P59036 64 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 PLAURQ03405 335 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 SHBQ15464 509 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 TMEM41BQ5BJD5 291 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 Q6ZSR6 202 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 UBALD2Q8IYN6 164 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 CSNK1A1LQ8N752 337 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 ATP6V0BQ99437 205 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 MANBALQ9NQG1 85 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 SLC35D1Q9NTN3 355 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 IGLC7A0M8Q6 106 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 H0YIG0 161 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 SLC31A1O15431 190 aa6.51□□□□□ -1.37
CDKL5-201ENST00000379989 RBFOX2O43251 390 aaKnown RBP eCLIP6.51□□□□□ -1.37
CDKL5-201ENST00000379989 CDS2O95674 445 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms