RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 RAB6AP20340 208 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 VMA21Q3ZAQ7 101 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF525Q8N782 197 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 TAAR8Q969N4 342 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 ISOC2Q96AB3 205 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 SDSLQ96GA7 329 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 THSD7BQ9C0I4 1608 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 IGHV3OR16-12A0A075B7B8 117 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 K7EM74 188 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 LY6HO94772 140 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 FAHP16930 419 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 CPT2P23786 658 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 RPS10P46783 165 aaKnown RBP5.69□□□□□ -1.5
NEDD9-202ENST00000379446 DOK3Q7L591 496 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF695Q8IW36 515 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 SSBP3Q9BWW4 388 aaPredicted RBP5.69□□□□□ -1.5
NEDD9-202ENST00000379446 GCM1Q9NP62 436 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 HEYLQ9NQ87 328 aaPredicted RBP5.69□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF835Q9Y2P0 537 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 MRPS28Q9Y2Q9 187 aaKnown RBP5.69□□□□□ -1.5
NEDD9-202ENST00000379446 ARFGEF3Q5TH69 2177 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 IMPA2O14732 288 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 EIF3GO75821 320 aaKnown RBP eCLIP5.69□□□□□ -1.5
NEDD9-202ENST00000379446 CYB5R3P00387 301 aaPredicted RBP5.69□□□□□ -1.5
NEDD9-202ENST00000379446 IFNA10P01566 189 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 THY1P04216 161 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 HTN3P15516 51 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 RPS4Y1P22090 263 aaKnown RBP5.69□□□□□ -1.5
NEDD9-202ENST00000379446 PTGFRP43088 359 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 LINC00303Q3SY05 128 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 MRM1Q6IN84 353 aaKnown RBP5.69□□□□□ -1.5
NEDD9-202ENST00000379446 DTX1Q86Y01 620 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 TMED6Q8WW62 240 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 MEGF10Q96KG7 1140 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 PECRQ9BY49 303 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 ST6GALNAC2Q9UJ37 374 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 RPH3ALQ9UNE2 315 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 DTX4Q9Y2E6 619 aa5.69□□□□□ -1.5
NEDD9-202ENST00000379446 GABARAPH6UMI1 98 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 SULT1C2O00338 296 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 ADRA2CP18825 462 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 WT1P19544 449 aaPredicted RBP5.68□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF93P35789 620 aaPredicted RBP5.68□□□□□ -1.5
NEDD9-202ENST00000379446 RBM34P42696 430 aaKnown RBP5.68□□□□□ -1.5
NEDD9-202ENST00000379446 NDUFA6P56556 154 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 PSG6Q00889 435 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF616Q08AN1 781 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 FOXF2Q12947 444 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 PRAMEF5Q5TYX0 476 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 RTL6Q6ICC9 239 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 BIVMQ86UB2 503 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 OR1S2Q8NGQ3 325 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 OR4F5Q8NH21 305 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 OR1S1Q8NH92 325 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 SLAMF9Q96A28 289 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 SAT2Q96F10 170 aaPredicted RBP5.68□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF681Q96N22 645 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 TAAR6Q96RI8 345 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 ELOVL1Q9BW60 279 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 SMIM3Q9BZL3 60 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 EIF5A2Q9GZV4 153 aaKnown RBP5.68□□□□□ -1.5
NEDD9-202ENST00000379446 ZDHHC8Q9ULC8 765 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 SIGLEC7Q9Y286 467 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 EXOGQ9Y2C4 368 aaKnown RBP5.68□□□□□ -1.5
NEDD9-202ENST00000379446 POMT1Q9Y6A1 747 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 URGCP-MRPS24S4R325 110 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 PLXNA4Q9HCM2 1894 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 HEATR5BQ9P2D3 2071 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 FAM221AA4D161 298 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 NEURL1O76050 574 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 AGTR1P30556 359 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 MDH2P40926 338 aaKnown RBP5.68□□□□□ -1.5
NEDD9-202ENST00000379446 NPY4RP50391 375 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF121P58317 390 aaPredicted RBP5.68□□□□□ -1.5
NEDD9-202ENST00000379446 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.68□□□□□ -1.5
NEDD9-202ENST00000379446 HACD4Q5VWC8 232 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF788Q6ZQV5 615 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 RHOUQ7L0Q8 258 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 FAM122BQ7Z309 247 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 UBE2DNLQ8IWF7 75 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 MESP1Q9BRJ9 268 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 NICN1Q9BSH3 213 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 CES1P1Q9UKY3 287 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 V9GY05 133 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 IGHV3-43A0A0B4J1X8 118 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 A0A1B0GV90 55 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 SNAPINO95295 136 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 IGHA1P01876 353 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 AMY2AP04746 511 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 IGHV3-43DP0DP04 118 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 GNB3P16520 340 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 CCR9P51686 369 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 ZNF136P52737 540 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 SNRPNP63162 240 aaKnown RBP5.68□□□□□ -1.5
NEDD9-202ENST00000379446 ALKBH1Q13686 389 aaKnown RBP5.68□□□□□ -1.5
NEDD9-202ENST00000379446 BATFQ16520 125 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 RNLSQ5VYX0 342 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 BAIAP2L2Q6UXY1 529 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 NR2C2APQ86WQ0 139 aa5.68□□□□□ -1.5
NEDD9-202ENST00000379446 TGIF2LYQ8IUE0 185 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms