RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 CXorf58Q96LI9 332 aa11.52□□□□□ -0.57
NPHP4-203ENST00000378169 PHF3Q92576 2039 aaKnown RBP11.51□□□□□ -0.57
NPHP4-203ENST00000378169 CNIH1O95406 144 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 FSTP19883 344 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 Q3ZCU0 254 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 LYPD8Q6UX82 237 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 PPP1R32Q7Z5V6 425 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 SLC25A40Q8TBP6 338 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 SOX7Q9BT81 388 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 SRXN1Q9BYN0 137 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 FN3KRPQ9HA64 309 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 FAM206AQ9NX38 181 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 NDRG3Q9UGV2 375 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 SOX15O60248 233 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 CST4P01036 141 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 FTH1P19P0C7X4 201 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 GNG10P50151 68 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 SPINK9Q5DT21 86 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 AVPI1Q5T686 147 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 CISD2Q8N5K1 135 aaKnown RBP11.51□□□□□ -0.57
NPHP4-203ENST00000378169 AKR1E2Q96JD6 320 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 NPAS1Q99742 590 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 CCL28Q9NRJ3 127 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 NOTCH3Q9UM47 2321 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 hCG_1809904A0A1W2PP81 198 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 A0A1W2PPE2 198 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 A0A1W2PR64 198 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 A0A1W2PRV1 198 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 ATP6V1G2-DDX39BF2Z307 99 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 METTL15P1P0C7V9 234 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 OR2B8PP59922 312 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 TAGLNQ01995 201 aaKnown RBP11.51□□□□□ -0.57
NPHP4-203ENST00000378169 TMEM267Q0VDI3 215 aaPredicted RBP11.51□□□□□ -0.57
NPHP4-203ENST00000378169 MIDNQ504T8 468 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 SLC23A3Q6PIS1 610 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 LYZL2Q7Z4W2 148 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 KLHDC3Q9BQ90 382 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 OR2D2Q9H210 308 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 G6PC2Q9NQR9 355 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 MED9Q9NWA0 146 aa11.51□□□□□ -0.57
NPHP4-203ENST00000378169 FCGR3BO75015 233 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 SCGB2A1O75556 95 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 CTSDP07339 412 aaPredicted RBP11.5□□□□□ -0.57
NPHP4-203ENST00000378169 LYG1Q8N1E2 194 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 OR2C3Q8N628 320 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 MITD1Q8WV92 249 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 C10orf35Q96D05 121 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 COMMD5Q9GZQ3 224 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 FOXJ2Q9P0K8 574 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 SSUH2Q9Y2M2 353 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 CHCHD2Q9Y6H1 151 aaPredicted RBP11.5□□□□□ -0.57
NPHP4-203ENST00000378169 FER1L5A0AVI2 2057 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 TRGV10A0A0A0MS01 117 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 K7ESF4 209 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 ABCD4O14678 606 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 CYB5BO43169 146 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 DEFA4P12838 97 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 FAM122CQ6P4D5 195 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 LINC00114Q6XXX2 140 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 GAPTQ8N292 157 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 A0A0U1RQV5 110 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 UBE2L5PA0A1B0GUS4 154 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 LPAR6P43657 344 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 GABRA4P48169 554 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 COL19A1Q14993 1142 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 ZNF260Q3ZCT1 412 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 TEX30Q5JUR7 227 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 TBC1D26Q86UD7 250 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 PRSS50Q9UI38 385 aa11.5□□□□□ -0.57
NPHP4-203ENST00000378169 ZNF727A8MUV8 499 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 ISG15P05161 165 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 Q5BKY6 102 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 ZNF787Q6DD87 383 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 FAHD2BQ6P2I3 314 aaPredicted RBP11.49□□□□□ -0.57
NPHP4-203ENST00000378169 FAHD2AQ96GK7 314 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 A0A0G2JK05 382 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 RGS13O14921 159 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 GPR37O15354 613 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 CYC1P08574 325 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 KLF3P57682 345 aaPredicted RBP11.49□□□□□ -0.57
NPHP4-203ENST00000378169 GNB1P62873 340 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 C1orf100Q5SVJ3 147 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 NUFIP2Q7Z417 695 aaKnown RBP11.49□□□□□ -0.57
NPHP4-203ENST00000378169 ZNF485Q8NCK3 441 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 NARFLQ9H6Q4 476 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 CUL9Q8IWT3 2517 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 A0A1W2PNV4 684 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 FAM90A27PA6NNH2 459 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 RPS11P62280 158 aaKnown RBP eCLIP11.49□□□□□ -0.57
NPHP4-203ENST00000378169 IL34Q6ZMJ4 242 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 TPRX1Q8N7U7 411 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 UHRF2Q96PU4 802 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 THADAQ6YHU6 1953 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 TNFRSF1AP19438 455 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 KLK2P20151 261 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 IL3RAP26951 378 aa11.49□□□□□ -0.57
NPHP4-203ENST00000378169 CPEB3Q8NE35 698 aaKnown RBP11.49□□□□□ -0.57
NPHP4-203ENST00000378169 PRR32B1ATL7 298 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 TRIM77I1YAP6 450 aa11.48□□□□□ -0.57
NPHP4-203ENST00000378169 GALR2O43603 387 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms