RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 DHRS11Q6UWP2 260 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 TOMM20LQ6UXN7 152 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 SLC24A4Q8NFF2 622 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 TMEM37Q8WXS4 190 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 MED19A0JLT2 244 aaPredicted RBP7.7□□□□□ -1.18
PCDH9-202ENST00000377865 RRP8O43159 456 aaKnown RBP7.7□□□□□ -1.18
PCDH9-202ENST00000377865 SYNGR2O43760 224 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 CHST1O43916 411 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 YIF1AO95070 293 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 SRP14P37108 136 aaKnown RBP7.7□□□□□ -1.18
PCDH9-202ENST00000377865 MPV17LQ2QL34 196 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 COX19Q49B96 90 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 WDR73Q6P4I2 378 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 FAM219AQ8IW50 185 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 OR10G4Q8NGN3 311 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 OR10G9Q8NGN4 311 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 OR10G7Q8NGN6 311 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 OR11L1Q8NGX0 322 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 P2RX4Q99571 388 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 GINS3Q9BRX5 216 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 FAM103A1Q9BTL3 118 aaKnown RBP7.7□□□□□ -1.18
PCDH9-202ENST00000377865 CFHR5Q9BXR6 569 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 IGHV1OR21-1A0A087WYE8 117 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 NRG2O14511 850 aaPredicted RBP7.7□□□□□ -1.18
PCDH9-202ENST00000377865 COL19A1Q14993 1142 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 TRAT1Q6PIZ9 186 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 RBMXL3Q8N7X1 1067 aaKnown RBP7.7□□□□□ -1.18
PCDH9-202ENST00000377865 SP7Q8TDD2 431 aaPredicted RBP7.7□□□□□ -1.18
PCDH9-202ENST00000377865 EDARADDQ8WWZ3 215 aa7.7□□□□□ -1.18
PCDH9-202ENST00000377865 KLRC4-KLRK1H3BQV0 150 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 MASP2O00187 686 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 BCL2P10415 239 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 IGFBP3P17936 291 aaPredicted RBP7.69□□□□□ -1.18
PCDH9-202ENST00000377865 G0S2P27469 103 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 S100A7P31151 101 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 CDC34P49427 236 aaPredicted RBP7.69□□□□□ -1.18
PCDH9-202ENST00000377865 RRADP55042 308 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 RAC1P63000 192 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 BHLHE23Q8NDY6 225 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 CMTM2Q8TAZ6 248 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 HLA-CQ95604 372 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 SNX22Q96L94 193 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 CCDC74BQ96LY2 380 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 OCIAD1Q9NX40 245 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 GRPP07492 148 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 PRF1P14222 555 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 ZNF32P17041 273 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 PMP22Q01453 160 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 RPEL1Q2QD12 228 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 TSPO2Q5TGU0 170 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 WDR13Q9H1Z4 485 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 HSF4Q9ULV5 492 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 GEMIN2O14893 280 aaKnown RBP7.69□□□□□ -1.18
PCDH9-202ENST00000377865 PDE6DO43924 150 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 ZNF17P17021 662 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 ERVS71-1P61550 626 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 LTC4SQ16873 150 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 DMRTC1Q5HYR2 192 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 D2HGDHQ8N465 521 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 ROBO4Q8WZ75 1007 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 SLC35E1Q96K37 410 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 ERRFI1Q9UJM3 462 aaPredicted RBP7.69□□□□□ -1.18
PCDH9-202ENST00000377865 PIKFYVEQ9Y2I7 2098 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 PIAS2O75928 621 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 KIR2DS2P43631 304 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 HNRNPA3P51991 378 aaKnown RBP7.69□□□□□ -1.18
PCDH9-202ENST00000377865 SERF2P84101 59 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 SMAD4Q13485 552 aaKnown RBP7.69□□□□□ -1.18
PCDH9-202ENST00000377865 LY6G6FQ5SQ64 297 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 GAPTQ8N292 157 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 CISD2Q8N5K1 135 aaKnown RBP7.69□□□□□ -1.18
PCDH9-202ENST00000377865 LRRC3BQ96PB8 259 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 GFI1Q99684 422 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 CISD1Q9NZ45 108 aaKnown RBP7.69□□□□□ -1.18
PCDH9-202ENST00000377865 OR5B21A6NL26 309 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 HRASP01112 189 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 KRASP01116 189 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 FGF8P55075 233 aaPredicted RBP7.69□□□□□ -1.18
PCDH9-202ENST00000377865 FZD5Q13467 585 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 RHBDD2Q6NTF9 364 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 MEGF10Q96KG7 1140 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 TAAR3PQ9P1P4 343 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 NINQ8N4C6 2090 aa7.69□□□□□ -1.18
PCDH9-202ENST00000377865 RPLP1P05386 114 aaKnown RBP7.68□□□□□ -1.18
PCDH9-202ENST00000377865 PGA4P0DJD7 388 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 SUB1P53999 127 aaKnown RBP eCLIP7.68□□□□□ -1.18
PCDH9-202ENST00000377865 SRSF5Q13243 272 aaKnown RBP7.68□□□□□ -1.18
PCDH9-202ENST00000377865 MYPOPQ86VE0 399 aaPredicted RBP7.68□□□□□ -1.18
PCDH9-202ENST00000377865 OR5AS1Q8N127 324 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 IFI44Q8TCB0 444 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 TMEM9BQ9NQ34 198 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 GSN-AS1Q9NRJ2 163 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 FAM90A10PA6NDY2 464 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 FAM90A18PA6NE21 464 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 FAM90A16PA6NEW6 464 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 FAM90A20PA6NIJ5 464 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 FAM90A8PA6NJQ4 464 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 FAM90A7PA6NKC0 464 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 FAM90A22PA8MWA6 464 aa7.68□□□□□ -1.18
PCDH9-202ENST00000377865 FAM90A12PA8MX19 464 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms